Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 AL391422.3-201ENST00000603791 2761 ntBASIC17.17■□□□□ 0.34
MBD3L3A6NE82 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 AC099778.1-201ENST00000568593 1911 ntBASIC17.17■□□□□ 0.34
MBD3L3A6NE82 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
MBD3L3A6NE82 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.16■□□□□ 0.34
MBD3L3A6NE82 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 CCR12P-201ENST00000446203 998 ntBASIC17.16■□□□□ 0.34
MBD3L3A6NE82 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 FAM87A-204ENST00000613235 858 ntBASIC17.16■□□□□ 0.34
MBD3L3A6NE82 AC116562.4-202ENST00000641738 218 ntBASIC17.16■□□□□ 0.34
MBD3L3A6NE82 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.16■□□□□ 0.34
MBD3L3A6NE82 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 AC092667.1-201ENST00000434301 2586 ntBASIC17.15■□□□□ 0.34
MBD3L3A6NE82 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 AC010203.1-204ENST00000548782 407 ntBASIC17.15■□□□□ 0.34
MBD3L3A6NE82 AL049597.2-201ENST00000565575 961 ntBASIC17.15■□□□□ 0.34
MBD3L3A6NE82 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 LINC01465-201ENST00000408887 1940 ntBASIC17.15■□□□□ 0.34
MBD3L3A6NE82 KRT8P41-201ENST00000533985 1514 ntBASIC17.15■□□□□ 0.34
MBD3L3A6NE82 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.15■□□□□ 0.34
MBD3L3A6NE82 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MBD3L3A6NE82 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
MBD3L3A6NE82 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 LIN28AP1-201ENST00000429574 405 ntBASIC17.14■□□□□ 0.33
MBD3L3A6NE82 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 AL590326.2-201ENST00000625139 305 ntBASIC17.14■□□□□ 0.33
MBD3L3A6NE82 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MBD3L3A6NE82 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.13■□□□□ 0.33
MBD3L3A6NE82 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MBD3L3A6NE82 INGX-201ENST00000359239 846 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms