Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp2Q9R061 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp2Q9R061 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp2Q9R061 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp2Q9R061 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp2Q9R061 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp2Q9R061 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nubp2Q9R061 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Nubp2Q9R061 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nubp2Q9R061 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nubp2Q9R061 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nubp2Q9R061 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nubp2Q9R061 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.67■□□□□ 0.9
Nubp2Q9R061 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nubp2Q9R061 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nubp2Q9R061 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nubp2Q9R061 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Nubp2Q9R061 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.66■□□□□ 0.9
Nubp2Q9R061 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nubp2Q9R061 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.65■□□□□ 0.9
Nubp2Q9R061 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nubp2Q9R061 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Nubp2Q9R061 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.64■□□□□ 0.89
Nubp2Q9R061 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nubp2Q9R061 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nubp2Q9R061 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nubp2Q9R061 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nubp2Q9R061 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nubp2Q9R061 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nubp2Q9R061 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.63■□□□□ 0.89
Nubp2Q9R061 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nubp2Q9R061 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nubp2Q9R061 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nubp2Q9R061 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nubp2Q9R061 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nubp2Q9R061 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nubp2Q9R061 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nubp2Q9R061 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.61■□□□□ 0.89
Nubp2Q9R061 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nubp2Q9R061 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Nubp2Q9R061 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nubp2Q9R061 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
Nubp2Q9R061 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nubp2Q9R061 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.59■□□□□ 0.89
Nubp2Q9R061 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nubp2Q9R061 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Nubp2Q9R061 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Nubp2Q9R061 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nubp2Q9R061 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nubp2Q9R061 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.57■□□□□ 0.88
Nubp2Q9R061 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nubp2Q9R061 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nubp2Q9R061 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nubp2Q9R061 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nubp2Q9R061 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nubp2Q9R061 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nubp2Q9R061 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nubp2Q9R061 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nubp2Q9R061 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.55■□□□□ 0.88
Nubp2Q9R061 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.55■□□□□ 0.88
Nubp2Q9R061 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nubp2Q9R061 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Nubp2Q9R061 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.54■□□□□ 0.88
Nubp2Q9R061 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Nubp2Q9R061 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.53■□□□□ 0.88
Nubp2Q9R061 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nubp2Q9R061 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nubp2Q9R061 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.53■□□□□ 0.88
Nubp2Q9R061 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Nubp2Q9R061 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nubp2Q9R061 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Nubp2Q9R061 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nubp2Q9R061 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Nubp2Q9R061 Gm7432-201ENSMUST00000210343 879 ntBASIC20.5■□□□□ 0.87
Nubp2Q9R061 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nubp2Q9R061 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nubp2Q9R061 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nubp2Q9R061 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nubp2Q9R061 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nubp2Q9R061 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nubp2Q9R061 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Nubp2Q9R061 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nubp2Q9R061 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nubp2Q9R061 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.48■□□□□ 0.87
Nubp2Q9R061 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nubp2Q9R061 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.48■□□□□ 0.87
Nubp2Q9R061 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nubp2Q9R061 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.47■□□□□ 0.87
Nubp2Q9R061 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nubp2Q9R061 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Nubp2Q9R061 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nubp2Q9R061 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nubp2Q9R061 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nubp2Q9R061 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nubp2Q9R061 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nubp2Q9R061 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.44■□□□□ 0.86
Nubp2Q9R061 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nubp2Q9R061 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.43■□□□□ 0.86
Nubp2Q9R061 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nubp2Q9R061 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms