Protein–RNA interactions for Protein: Q9JJX7

Tdp2, Tyrosyl-DNA phosphodiesterase 2, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp2Q9JJX7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Tdp2Q9JJX7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Tdp2Q9JJX7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Tdp2Q9JJX7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tdp2Q9JJX7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Tdp2Q9JJX7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.28■■□□□ 1.32
Tdp2Q9JJX7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Tdp2Q9JJX7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.27■■□□□ 1.32
Tdp2Q9JJX7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Tdp2Q9JJX7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tdp2Q9JJX7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Tdp2Q9JJX7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Tdp2Q9JJX7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.26■■□□□ 1.31
Tdp2Q9JJX7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.26■■□□□ 1.31
Tdp2Q9JJX7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Tdp2Q9JJX7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Tdp2Q9JJX7 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp2Q9JJX7 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.25■■□□□ 1.31
Tdp2Q9JJX7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp2Q9JJX7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Tdp2Q9JJX7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Tdp2Q9JJX7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Tdp2Q9JJX7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp2Q9JJX7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp2Q9JJX7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp2Q9JJX7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp2Q9JJX7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp2Q9JJX7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Tdp2Q9JJX7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Tdp2Q9JJX7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Tdp2Q9JJX7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tdp2Q9JJX7 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.21■■□□□ 1.31
Tdp2Q9JJX7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Tdp2Q9JJX7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Tdp2Q9JJX7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Tdp2Q9JJX7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tdp2Q9JJX7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Tdp2Q9JJX7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Tdp2Q9JJX7 Gm24970-201ENSMUST00000175582 82 ntBASIC23.2■■□□□ 1.3
Tdp2Q9JJX7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Tdp2Q9JJX7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Tdp2Q9JJX7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Tdp2Q9JJX7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.19■■□□□ 1.3
Tdp2Q9JJX7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Tdp2Q9JJX7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tdp2Q9JJX7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.18■■□□□ 1.3
Tdp2Q9JJX7 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.18■■□□□ 1.3
Tdp2Q9JJX7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Tdp2Q9JJX7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tdp2Q9JJX7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.17■■□□□ 1.3
Tdp2Q9JJX7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tdp2Q9JJX7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Tdp2Q9JJX7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Tdp2Q9JJX7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp2Q9JJX7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp2Q9JJX7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp2Q9JJX7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp2Q9JJX7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp2Q9JJX7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp2Q9JJX7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp2Q9JJX7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Tdp2Q9JJX7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Tdp2Q9JJX7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Tdp2Q9JJX7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Tdp2Q9JJX7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.15■■□□□ 1.3
Tdp2Q9JJX7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Tdp2Q9JJX7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Tdp2Q9JJX7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tdp2Q9JJX7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tdp2Q9JJX7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Tdp2Q9JJX7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp2Q9JJX7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp2Q9JJX7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp2Q9JJX7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tdp2Q9JJX7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tdp2Q9JJX7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tdp2Q9JJX7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Tdp2Q9JJX7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.11■■□□□ 1.29
Tdp2Q9JJX7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp2Q9JJX7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Tdp2Q9JJX7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tdp2Q9JJX7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tdp2Q9JJX7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Tdp2Q9JJX7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Tdp2Q9JJX7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tdp2Q9JJX7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.08■■□□□ 1.29
Tdp2Q9JJX7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp2Q9JJX7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp2Q9JJX7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Tdp2Q9JJX7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Tdp2Q9JJX7 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp2Q9JJX7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp2Q9JJX7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp2Q9JJX7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tdp2Q9JJX7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tdp2Q9JJX7 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tdp2Q9JJX7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tdp2Q9JJX7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.05■■□□□ 1.28
Tdp2Q9JJX7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tdp2Q9JJX7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms