Protein–RNA interactions for Protein: Q9JJ48

Zc3h8, Zinc finger CCCH domain-containing protein 8, mousemouse

Known RBP Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h8Q9JJ48 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Zc3h8Q9JJ48 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22■■□□□ 1.11
Zc3h8Q9JJ48 Gm5987-201ENSMUST00000196433 1151 ntBASIC22■■□□□ 1.11
Zc3h8Q9JJ48 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22■■□□□ 1.11
Zc3h8Q9JJ48 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Zc3h8Q9JJ48 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Zc3h8Q9JJ48 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zc3h8Q9JJ48 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Zc3h8Q9JJ48 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Zc3h8Q9JJ48 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Zc3h8Q9JJ48 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.96■■□□□ 1.11
Zc3h8Q9JJ48 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Zc3h8Q9JJ48 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Zc3h8Q9JJ48 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Zc3h8Q9JJ48 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Zc3h8Q9JJ48 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Zc3h8Q9JJ48 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zc3h8Q9JJ48 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Zc3h8Q9JJ48 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Zc3h8Q9JJ48 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Zc3h8Q9JJ48 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Zc3h8Q9JJ48 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Zc3h8Q9JJ48 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Zc3h8Q9JJ48 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Zc3h8Q9JJ48 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Zc3h8Q9JJ48 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Zc3h8Q9JJ48 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Zc3h8Q9JJ48 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Zc3h8Q9JJ48 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Zc3h8Q9JJ48 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.87■■□□□ 1.09
Zc3h8Q9JJ48 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.85■■□□□ 1.09
Zc3h8Q9JJ48 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Zc3h8Q9JJ48 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.84■■□□□ 1.09
Zc3h8Q9JJ48 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.84■■□□□ 1.09
Zc3h8Q9JJ48 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Zc3h8Q9JJ48 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.83■■□□□ 1.08
Zc3h8Q9JJ48 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Zc3h8Q9JJ48 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Zc3h8Q9JJ48 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Zc3h8Q9JJ48 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Zc3h8Q9JJ48 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Zc3h8Q9JJ48 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Zc3h8Q9JJ48 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc3h8Q9JJ48 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.78■■□□□ 1.08
Zc3h8Q9JJ48 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc3h8Q9JJ48 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Zc3h8Q9JJ48 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.77■■□□□ 1.08
Zc3h8Q9JJ48 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Zc3h8Q9JJ48 Gm37136-201ENSMUST00000194368 194 ntBASIC21.77■■□□□ 1.08
Zc3h8Q9JJ48 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Zc3h8Q9JJ48 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h8Q9JJ48 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Zc3h8Q9JJ48 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Zc3h8Q9JJ48 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h8Q9JJ48 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Zc3h8Q9JJ48 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h8Q9JJ48 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h8Q9JJ48 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h8Q9JJ48 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h8Q9JJ48 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Zc3h8Q9JJ48 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h8Q9JJ48 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Zc3h8Q9JJ48 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h8Q9JJ48 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h8Q9JJ48 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.71■■□□□ 1.07
Zc3h8Q9JJ48 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.71■■□□□ 1.07
Zc3h8Q9JJ48 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h8Q9JJ48 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Zc3h8Q9JJ48 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Zc3h8Q9JJ48 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.7■■□□□ 1.06
Zc3h8Q9JJ48 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.7■■□□□ 1.06
Zc3h8Q9JJ48 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h8Q9JJ48 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h8Q9JJ48 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Zc3h8Q9JJ48 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Zc3h8Q9JJ48 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.68■■□□□ 1.06
Zc3h8Q9JJ48 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Zc3h8Q9JJ48 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Zc3h8Q9JJ48 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.67■■□□□ 1.06
Zc3h8Q9JJ48 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Zc3h8Q9JJ48 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.66■■□□□ 1.06
Zc3h8Q9JJ48 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Zc3h8Q9JJ48 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Zc3h8Q9JJ48 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Zc3h8Q9JJ48 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Zc3h8Q9JJ48 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Zc3h8Q9JJ48 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zc3h8Q9JJ48 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Zc3h8Q9JJ48 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Zc3h8Q9JJ48 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.62■■□□□ 1.05
Zc3h8Q9JJ48 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Zc3h8Q9JJ48 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Zc3h8Q9JJ48 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Zc3h8Q9JJ48 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.62■■□□□ 1.05
Zc3h8Q9JJ48 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Zc3h8Q9JJ48 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Zc3h8Q9JJ48 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Zc3h8Q9JJ48 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.61■■□□□ 1.05
Zc3h8Q9JJ48 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Zc3h8Q9JJ48 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms