Protein–RNA interactions for Protein: Q9JI58

Raet1d, Retinoic acid early-inducible protein 1-delta, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1dQ9JI58 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Raet1dQ9JI58 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.85■■□□□ 1.09
Raet1dQ9JI58 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Raet1dQ9JI58 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Raet1dQ9JI58 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Raet1dQ9JI58 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Raet1dQ9JI58 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Raet1dQ9JI58 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Raet1dQ9JI58 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Raet1dQ9JI58 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Raet1dQ9JI58 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.82■■□□□ 1.08
Raet1dQ9JI58 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.82■■□□□ 1.08
Raet1dQ9JI58 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Raet1dQ9JI58 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.82■■□□□ 1.08
Raet1dQ9JI58 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Raet1dQ9JI58 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Raet1dQ9JI58 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Raet1dQ9JI58 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Raet1dQ9JI58 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Raet1dQ9JI58 Gm8503-201ENSMUST00000118131 455 ntBASIC21.8■■□□□ 1.08
Raet1dQ9JI58 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.8■■□□□ 1.08
Raet1dQ9JI58 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Raet1dQ9JI58 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Raet1dQ9JI58 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Raet1dQ9JI58 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.79■■□□□ 1.08
Raet1dQ9JI58 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Raet1dQ9JI58 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Raet1dQ9JI58 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Raet1dQ9JI58 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Raet1dQ9JI58 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Raet1dQ9JI58 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Raet1dQ9JI58 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Raet1dQ9JI58 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Raet1dQ9JI58 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Raet1dQ9JI58 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.77■■□□□ 1.08
Raet1dQ9JI58 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Raet1dQ9JI58 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Raet1dQ9JI58 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.76■■□□□ 1.07
Raet1dQ9JI58 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Raet1dQ9JI58 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Raet1dQ9JI58 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.75■■□□□ 1.07
Raet1dQ9JI58 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raet1dQ9JI58 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Raet1dQ9JI58 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Raet1dQ9JI58 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Raet1dQ9JI58 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Raet1dQ9JI58 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Raet1dQ9JI58 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Raet1dQ9JI58 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Raet1dQ9JI58 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Raet1dQ9JI58 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.71■■□□□ 1.07
Raet1dQ9JI58 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.71■■□□□ 1.07
Raet1dQ9JI58 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Raet1dQ9JI58 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Raet1dQ9JI58 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Raet1dQ9JI58 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1dQ9JI58 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1dQ9JI58 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1dQ9JI58 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1dQ9JI58 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Raet1dQ9JI58 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.67■■□□□ 1.06
Raet1dQ9JI58 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Raet1dQ9JI58 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
Raet1dQ9JI58 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.66■■□□□ 1.06
Raet1dQ9JI58 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Raet1dQ9JI58 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Raet1dQ9JI58 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Raet1dQ9JI58 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.65■■□□□ 1.06
Raet1dQ9JI58 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.65■■□□□ 1.06
Raet1dQ9JI58 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Raet1dQ9JI58 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Raet1dQ9JI58 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Raet1dQ9JI58 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Raet1dQ9JI58 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Raet1dQ9JI58 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Raet1dQ9JI58 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Raet1dQ9JI58 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Raet1dQ9JI58 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Raet1dQ9JI58 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.61■■□□□ 1.05
Raet1dQ9JI58 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Raet1dQ9JI58 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Raet1dQ9JI58 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Raet1dQ9JI58 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Raet1dQ9JI58 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
Raet1dQ9JI58 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Raet1dQ9JI58 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Raet1dQ9JI58 Particl-201ENSMUST00000205370 1560 ntBASIC21.6■■□□□ 1.05
Raet1dQ9JI58 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Raet1dQ9JI58 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Raet1dQ9JI58 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.59■■□□□ 1.05
Raet1dQ9JI58 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Raet1dQ9JI58 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Raet1dQ9JI58 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Raet1dQ9JI58 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Raet1dQ9JI58 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Raet1dQ9JI58 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Raet1dQ9JI58 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.57■■□□□ 1.04
Raet1dQ9JI58 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Raet1dQ9JI58 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.57■■□□□ 1.04
Raet1dQ9JI58 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms