Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ube4bQ9ES00 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ube4bQ9ES00 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.44■■□□□ 1.18
Ube4bQ9ES00 Peli2-204ENSMUST00000226513 1320 ntBASIC22.44■■□□□ 1.18
Ube4bQ9ES00 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ube4bQ9ES00 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.43■■□□□ 1.18
Ube4bQ9ES00 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
Ube4bQ9ES00 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.43■■□□□ 1.18
Ube4bQ9ES00 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.42■■□□□ 1.18
Ube4bQ9ES00 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4bQ9ES00 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Ube4bQ9ES00 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4bQ9ES00 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ube4bQ9ES00 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4bQ9ES00 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4bQ9ES00 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4bQ9ES00 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
Ube4bQ9ES00 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.41■■□□□ 1.18
Ube4bQ9ES00 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4bQ9ES00 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ube4bQ9ES00 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4bQ9ES00 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4bQ9ES00 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Ube4bQ9ES00 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
Ube4bQ9ES00 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ube4bQ9ES00 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.39■■□□□ 1.18
Ube4bQ9ES00 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.39■■□□□ 1.17
Ube4bQ9ES00 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ube4bQ9ES00 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4bQ9ES00 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
Ube4bQ9ES00 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4bQ9ES00 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ube4bQ9ES00 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4bQ9ES00 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4bQ9ES00 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ube4bQ9ES00 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
Ube4bQ9ES00 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Ube4bQ9ES00 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4bQ9ES00 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4bQ9ES00 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4bQ9ES00 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ube4bQ9ES00 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ube4bQ9ES00 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Ube4bQ9ES00 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Ube4bQ9ES00 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ube4bQ9ES00 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Ube4bQ9ES00 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ube4bQ9ES00 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4bQ9ES00 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4bQ9ES00 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
Ube4bQ9ES00 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.33■■□□□ 1.17
Ube4bQ9ES00 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ube4bQ9ES00 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4bQ9ES00 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Ube4bQ9ES00 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ube4bQ9ES00 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Ube4bQ9ES00 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ube4bQ9ES00 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Ube4bQ9ES00 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
Ube4bQ9ES00 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4bQ9ES00 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4bQ9ES00 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4bQ9ES00 Gm24804-201ENSMUST00000174982 85 ntBASIC22.29■■□□□ 1.16
Ube4bQ9ES00 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ube4bQ9ES00 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Ube4bQ9ES00 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.28■■□□□ 1.16
Ube4bQ9ES00 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4bQ9ES00 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4bQ9ES00 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4bQ9ES00 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4bQ9ES00 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ube4bQ9ES00 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4bQ9ES00 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4bQ9ES00 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4bQ9ES00 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ube4bQ9ES00 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4bQ9ES00 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ube4bQ9ES00 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.25■■□□□ 1.15
Ube4bQ9ES00 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Ube4bQ9ES00 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4bQ9ES00 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ube4bQ9ES00 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4bQ9ES00 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4bQ9ES00 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ube4bQ9ES00 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
Ube4bQ9ES00 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4bQ9ES00 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4bQ9ES00 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4bQ9ES00 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ube4bQ9ES00 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Ube4bQ9ES00 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ube4bQ9ES00 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4bQ9ES00 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4bQ9ES00 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Ube4bQ9ES00 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4bQ9ES00 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ube4bQ9ES00 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ube4bQ9ES00 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.21■■□□□ 1.15
Ube4bQ9ES00 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ube4bQ9ES00 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 173.9 ms