Protein–RNA interactions for Protein: Q9ER99

Rsc1a1, Regulatory solute carrier protein family 1 member 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsc1a1Q9ER99 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rsc1a1Q9ER99 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rsc1a1Q9ER99 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rsc1a1Q9ER99 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rsc1a1Q9ER99 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rsc1a1Q9ER99 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rsc1a1Q9ER99 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rsc1a1Q9ER99 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rsc1a1Q9ER99 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rsc1a1Q9ER99 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rsc1a1Q9ER99 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rsc1a1Q9ER99 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rsc1a1Q9ER99 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rsc1a1Q9ER99 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.19■■□□□ 1.3
Rsc1a1Q9ER99 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rsc1a1Q9ER99 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rsc1a1Q9ER99 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rsc1a1Q9ER99 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rsc1a1Q9ER99 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rsc1a1Q9ER99 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rsc1a1Q9ER99 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Rsc1a1Q9ER99 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.17■■□□□ 1.3
Rsc1a1Q9ER99 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.16■■□□□ 1.3
Rsc1a1Q9ER99 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rsc1a1Q9ER99 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rsc1a1Q9ER99 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rsc1a1Q9ER99 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rsc1a1Q9ER99 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rsc1a1Q9ER99 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rsc1a1Q9ER99 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rsc1a1Q9ER99 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rsc1a1Q9ER99 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rsc1a1Q9ER99 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Rsc1a1Q9ER99 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rsc1a1Q9ER99 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
Rsc1a1Q9ER99 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rsc1a1Q9ER99 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rsc1a1Q9ER99 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rsc1a1Q9ER99 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rsc1a1Q9ER99 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rsc1a1Q9ER99 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rsc1a1Q9ER99 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rsc1a1Q9ER99 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rsc1a1Q9ER99 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rsc1a1Q9ER99 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rsc1a1Q9ER99 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rsc1a1Q9ER99 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rsc1a1Q9ER99 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rsc1a1Q9ER99 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rsc1a1Q9ER99 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rsc1a1Q9ER99 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rsc1a1Q9ER99 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rsc1a1Q9ER99 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.08■■□□□ 1.29
Rsc1a1Q9ER99 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Rsc1a1Q9ER99 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rsc1a1Q9ER99 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rsc1a1Q9ER99 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.07■■□□□ 1.28
Rsc1a1Q9ER99 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rsc1a1Q9ER99 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.07■■□□□ 1.28
Rsc1a1Q9ER99 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Rsc1a1Q9ER99 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rsc1a1Q9ER99 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
Rsc1a1Q9ER99 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.06■■□□□ 1.28
Rsc1a1Q9ER99 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Rsc1a1Q9ER99 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rsc1a1Q9ER99 Zfp131-205ENSMUST00000223812 663 ntBASIC23.06■■□□□ 1.28
Rsc1a1Q9ER99 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rsc1a1Q9ER99 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rsc1a1Q9ER99 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rsc1a1Q9ER99 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rsc1a1Q9ER99 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rsc1a1Q9ER99 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rsc1a1Q9ER99 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rsc1a1Q9ER99 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rsc1a1Q9ER99 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
Rsc1a1Q9ER99 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rsc1a1Q9ER99 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rsc1a1Q9ER99 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rsc1a1Q9ER99 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rsc1a1Q9ER99 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rsc1a1Q9ER99 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rsc1a1Q9ER99 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rsc1a1Q9ER99 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rsc1a1Q9ER99 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rsc1a1Q9ER99 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.02■■□□□ 1.28
Rsc1a1Q9ER99 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Rsc1a1Q9ER99 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rsc1a1Q9ER99 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.01■■□□□ 1.27
Rsc1a1Q9ER99 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rsc1a1Q9ER99 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rsc1a1Q9ER99 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rsc1a1Q9ER99 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rsc1a1Q9ER99 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Rsc1a1Q9ER99 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rsc1a1Q9ER99 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rsc1a1Q9ER99 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Rsc1a1Q9ER99 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Rsc1a1Q9ER99 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rsc1a1Q9ER99 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rsc1a1Q9ER99 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms