Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Vmn1r40Q9EQ46 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Vmn1r40Q9EQ46 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.5■■□□□ 1.19
Vmn1r40Q9EQ46 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
Vmn1r40Q9EQ46 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Vmn1r40Q9EQ46 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.49■■□□□ 1.19
Vmn1r40Q9EQ46 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Vmn1r40Q9EQ46 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Vmn1r40Q9EQ46 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Vmn1r40Q9EQ46 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Vmn1r40Q9EQ46 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Vmn1r40Q9EQ46 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.46■■□□□ 1.19
Vmn1r40Q9EQ46 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Vmn1r40Q9EQ46 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.46■■□□□ 1.19
Vmn1r40Q9EQ46 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r40Q9EQ46 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r40Q9EQ46 Gm6311-201ENSMUST00000073790 878 ntBASIC22.45■■□□□ 1.18
Vmn1r40Q9EQ46 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Vmn1r40Q9EQ46 Gm37136-201ENSMUST00000194368 194 ntBASIC22.44■■□□□ 1.18
Vmn1r40Q9EQ46 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Vmn1r40Q9EQ46 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Vmn1r40Q9EQ46 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Vmn1r40Q9EQ46 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r40Q9EQ46 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r40Q9EQ46 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.42■■□□□ 1.18
Vmn1r40Q9EQ46 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Vmn1r40Q9EQ46 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.42■■□□□ 1.18
Vmn1r40Q9EQ46 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Vmn1r40Q9EQ46 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Vmn1r40Q9EQ46 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Vmn1r40Q9EQ46 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r40Q9EQ46 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r40Q9EQ46 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r40Q9EQ46 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r40Q9EQ46 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Vmn1r40Q9EQ46 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r40Q9EQ46 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Vmn1r40Q9EQ46 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r40Q9EQ46 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.39■■□□□ 1.17
Vmn1r40Q9EQ46 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r40Q9EQ46 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r40Q9EQ46 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.38■■□□□ 1.17
Vmn1r40Q9EQ46 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.38■■□□□ 1.17
Vmn1r40Q9EQ46 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r40Q9EQ46 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r40Q9EQ46 Gm4799-201ENSMUST00000095396 657 ntBASIC22.37■■□□□ 1.17
Vmn1r40Q9EQ46 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r40Q9EQ46 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r40Q9EQ46 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Vmn1r40Q9EQ46 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vmn1r40Q9EQ46 Mir6538-201ENSMUST00000183713 110 ntBASIC22.35■■□□□ 1.17
Vmn1r40Q9EQ46 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vmn1r40Q9EQ46 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.34■■□□□ 1.17
Vmn1r40Q9EQ46 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.34■■□□□ 1.17
Vmn1r40Q9EQ46 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r40Q9EQ46 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.34■■□□□ 1.17
Vmn1r40Q9EQ46 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r40Q9EQ46 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
Vmn1r40Q9EQ46 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.33■■□□□ 1.17
Vmn1r40Q9EQ46 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Vmn1r40Q9EQ46 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r40Q9EQ46 Gm11175-201ENSMUST00000116172 543 ntBASIC22.32■■□□□ 1.16
Vmn1r40Q9EQ46 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.31■■□□□ 1.16
Vmn1r40Q9EQ46 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r40Q9EQ46 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r40Q9EQ46 Mir3960-201ENSMUST00000198213 73 ntBASIC22.31■■□□□ 1.16
Vmn1r40Q9EQ46 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Vmn1r40Q9EQ46 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r40Q9EQ46 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r40Q9EQ46 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r40Q9EQ46 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r40Q9EQ46 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r40Q9EQ46 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r40Q9EQ46 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Vmn1r40Q9EQ46 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Vmn1r40Q9EQ46 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r40Q9EQ46 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Vmn1r40Q9EQ46 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r40Q9EQ46 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r40Q9EQ46 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.26■■□□□ 1.15
Vmn1r40Q9EQ46 Amer2-203ENSMUST00000225247 2662 ntBASIC22.26■■□□□ 1.15
Vmn1r40Q9EQ46 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r40Q9EQ46 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r40Q9EQ46 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r40Q9EQ46 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.25■■□□□ 1.15
Vmn1r40Q9EQ46 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.24■■□□□ 1.15
Vmn1r40Q9EQ46 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r40Q9EQ46 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.23■■□□□ 1.15
Vmn1r40Q9EQ46 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r40Q9EQ46 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r40Q9EQ46 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.22■■□□□ 1.15
Vmn1r40Q9EQ46 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r40Q9EQ46 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r40Q9EQ46 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r40Q9EQ46 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r40Q9EQ46 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.22■■□□□ 1.15
Vmn1r40Q9EQ46 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.22■■□□□ 1.15
Vmn1r40Q9EQ46 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r40Q9EQ46 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.2■■□□□ 1.14
Vmn1r40Q9EQ46 Gm45364-201ENSMUST00000210883 159 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms