Protein–RNA interactions for Protein: Q9DBQ9

Swt1, Transcriptional protein SWT1, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swt1Q9DBQ9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Swt1Q9DBQ9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC30.82■■■□□ 2.52
Swt1Q9DBQ9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.82■■■□□ 2.52
Swt1Q9DBQ9 Particl-201ENSMUST00000205370 1560 ntBASIC30.81■■■□□ 2.52
Swt1Q9DBQ9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Swt1Q9DBQ9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.81■■■□□ 2.52
Swt1Q9DBQ9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Swt1Q9DBQ9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Swt1Q9DBQ9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Swt1Q9DBQ9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Swt1Q9DBQ9 Gm11599-201ENSMUST00000118720 878 ntBASIC30.78■■■□□ 2.52
Swt1Q9DBQ9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Swt1Q9DBQ9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC30.77■■■□□ 2.52
Swt1Q9DBQ9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Swt1Q9DBQ9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
Swt1Q9DBQ9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Swt1Q9DBQ9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC30.74■■■□□ 2.51
Swt1Q9DBQ9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Swt1Q9DBQ9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Swt1Q9DBQ9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.7■■■□□ 2.51
Swt1Q9DBQ9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Swt1Q9DBQ9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Swt1Q9DBQ9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Swt1Q9DBQ9 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.68■■■□□ 2.5
Swt1Q9DBQ9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Swt1Q9DBQ9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Swt1Q9DBQ9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Swt1Q9DBQ9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Swt1Q9DBQ9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Swt1Q9DBQ9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Swt1Q9DBQ9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Swt1Q9DBQ9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC30.63■■■□□ 2.49
Swt1Q9DBQ9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.62■■■□□ 2.49
Swt1Q9DBQ9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Swt1Q9DBQ9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
Swt1Q9DBQ9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC30.6■■■□□ 2.49
Swt1Q9DBQ9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Swt1Q9DBQ9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Swt1Q9DBQ9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Swt1Q9DBQ9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Swt1Q9DBQ9 Gm37136-201ENSMUST00000194368 194 ntBASIC30.57■■■□□ 2.48
Swt1Q9DBQ9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Swt1Q9DBQ9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
Swt1Q9DBQ9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.56■■■□□ 2.48
Swt1Q9DBQ9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Swt1Q9DBQ9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Swt1Q9DBQ9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Swt1Q9DBQ9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Swt1Q9DBQ9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
Swt1Q9DBQ9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Swt1Q9DBQ9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Swt1Q9DBQ9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Swt1Q9DBQ9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Swt1Q9DBQ9 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.5■■■□□ 2.47
Swt1Q9DBQ9 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.5■■■□□ 2.47
Swt1Q9DBQ9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.49■■■□□ 2.47
Swt1Q9DBQ9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Swt1Q9DBQ9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Swt1Q9DBQ9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Swt1Q9DBQ9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.48■■■□□ 2.47
Swt1Q9DBQ9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Swt1Q9DBQ9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Swt1Q9DBQ9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Swt1Q9DBQ9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
Swt1Q9DBQ9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Swt1Q9DBQ9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
Swt1Q9DBQ9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Swt1Q9DBQ9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC30.45■■■□□ 2.47
Swt1Q9DBQ9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Swt1Q9DBQ9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Swt1Q9DBQ9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
Swt1Q9DBQ9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Swt1Q9DBQ9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Swt1Q9DBQ9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Swt1Q9DBQ9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
Swt1Q9DBQ9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Swt1Q9DBQ9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
Swt1Q9DBQ9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Swt1Q9DBQ9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Swt1Q9DBQ9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Swt1Q9DBQ9 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.37■■■□□ 2.45
Swt1Q9DBQ9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Swt1Q9DBQ9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Swt1Q9DBQ9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Swt1Q9DBQ9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
Swt1Q9DBQ9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Swt1Q9DBQ9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC30.35■■■□□ 2.45
Swt1Q9DBQ9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC30.35■■■□□ 2.45
Swt1Q9DBQ9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Swt1Q9DBQ9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Swt1Q9DBQ9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Swt1Q9DBQ9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.33■■■□□ 2.45
Swt1Q9DBQ9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Swt1Q9DBQ9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.32■■■□□ 2.44
Swt1Q9DBQ9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Swt1Q9DBQ9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
Swt1Q9DBQ9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Swt1Q9DBQ9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Swt1Q9DBQ9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.31■■■□□ 2.44
Swt1Q9DBQ9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms