Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Raf1Q99N57 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Raf1Q99N57 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Raf1Q99N57 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Raf1Q99N57 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Raf1Q99N57 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.89■□□□□ 0.93
Raf1Q99N57 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Raf1Q99N57 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Raf1Q99N57 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Raf1Q99N57 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Raf1Q99N57 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.88■□□□□ 0.93
Raf1Q99N57 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Raf1Q99N57 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Raf1Q99N57 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Raf1Q99N57 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Raf1Q99N57 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Raf1Q99N57 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Raf1Q99N57 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Raf1Q99N57 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Raf1Q99N57 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Raf1Q99N57 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Raf1Q99N57 Gm8503-201ENSMUST00000118131 455 ntBASIC20.84■□□□□ 0.93
Raf1Q99N57 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.84■□□□□ 0.93
Raf1Q99N57 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Raf1Q99N57 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Raf1Q99N57 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Raf1Q99N57 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Raf1Q99N57 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Raf1Q99N57 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Raf1Q99N57 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Raf1Q99N57 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Raf1Q99N57 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.82■□□□□ 0.92
Raf1Q99N57 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.82■□□□□ 0.92
Raf1Q99N57 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Raf1Q99N57 Gm6821-201ENSMUST00000107540 542 ntBASIC20.81■□□□□ 0.92
Raf1Q99N57 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Raf1Q99N57 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Raf1Q99N57 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Raf1Q99N57 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raf1Q99N57 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raf1Q99N57 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raf1Q99N57 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raf1Q99N57 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Raf1Q99N57 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Raf1Q99N57 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.79■□□□□ 0.92
Raf1Q99N57 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Raf1Q99N57 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Raf1Q99N57 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Raf1Q99N57 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Raf1Q99N57 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Raf1Q99N57 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Raf1Q99N57 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Raf1Q99N57 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Raf1Q99N57 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Raf1Q99N57 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Raf1Q99N57 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Raf1Q99N57 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Raf1Q99N57 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Raf1Q99N57 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.76■□□□□ 0.91
Raf1Q99N57 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.75■□□□□ 0.91
Raf1Q99N57 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Raf1Q99N57 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Raf1Q99N57 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Raf1Q99N57 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Raf1Q99N57 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Raf1Q99N57 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Raf1Q99N57 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Raf1Q99N57 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Raf1Q99N57 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Raf1Q99N57 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Raf1Q99N57 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Raf1Q99N57 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.72■□□□□ 0.91
Raf1Q99N57 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Raf1Q99N57 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Raf1Q99N57 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Raf1Q99N57 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Raf1Q99N57 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Raf1Q99N57 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Raf1Q99N57 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Raf1Q99N57 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Raf1Q99N57 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Raf1Q99N57 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.69■□□□□ 0.9
Raf1Q99N57 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Raf1Q99N57 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Raf1Q99N57 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Raf1Q99N57 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Raf1Q99N57 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Raf1Q99N57 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Raf1Q99N57 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Raf1Q99N57 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Raf1Q99N57 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Raf1Q99N57 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raf1Q99N57 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Raf1Q99N57 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.66■□□□□ 0.9
Raf1Q99N57 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Raf1Q99N57 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Raf1Q99N57 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raf1Q99N57 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Raf1Q99N57 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Raf1Q99N57 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms