Protein–RNA interactions for Protein: Q923L3

Csmd1, CUB and sushi domain-containing protein 1, mousemouse

Predictions only

Length 3,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd1Q923L3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Csmd1Q923L3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Csmd1Q923L3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.4■□□□□ 0.86
Csmd1Q923L3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Csmd1Q923L3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Csmd1Q923L3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Csmd1Q923L3 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Csmd1Q923L3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd1Q923L3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd1Q923L3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.37■□□□□ 0.85
Csmd1Q923L3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd1Q923L3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd1Q923L3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd1Q923L3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd1Q923L3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd1Q923L3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Csmd1Q923L3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Csmd1Q923L3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.36■□□□□ 0.85
Csmd1Q923L3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Csmd1Q923L3 Gm27502-201ENSMUST00000183495 199 ntBASIC20.36■□□□□ 0.85
Csmd1Q923L3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.36■□□□□ 0.85
Csmd1Q923L3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Csmd1Q923L3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Csmd1Q923L3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Csmd1Q923L3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Csmd1Q923L3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Csmd1Q923L3 Gm5921-201ENSMUST00000075898 882 ntBASIC20.34■□□□□ 0.85
Csmd1Q923L3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Csmd1Q923L3 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Csmd1Q923L3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Csmd1Q923L3 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Csmd1Q923L3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.33■□□□□ 0.84
Csmd1Q923L3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Csmd1Q923L3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Csmd1Q923L3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Csmd1Q923L3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Csmd1Q923L3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.31■□□□□ 0.84
Csmd1Q923L3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Csmd1Q923L3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.31■□□□□ 0.84
Csmd1Q923L3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Csmd1Q923L3 Gm15546-201ENSMUST00000122095 826 ntBASIC20.3■□□□□ 0.84
Csmd1Q923L3 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.3■□□□□ 0.84
Csmd1Q923L3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.29■□□□□ 0.84
Csmd1Q923L3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Csmd1Q923L3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.28■□□□□ 0.84
Csmd1Q923L3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Csmd1Q923L3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Csmd1Q923L3 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.27■□□□□ 0.84
Csmd1Q923L3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Csmd1Q923L3 Gm45364-201ENSMUST00000210883 159 ntBASIC20.27■□□□□ 0.84
Csmd1Q923L3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Csmd1Q923L3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csmd1Q923L3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csmd1Q923L3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csmd1Q923L3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.26■□□□□ 0.83
Csmd1Q923L3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csmd1Q923L3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csmd1Q923L3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csmd1Q923L3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Csmd1Q923L3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Csmd1Q923L3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.25■□□□□ 0.83
Csmd1Q923L3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Csmd1Q923L3 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.24■□□□□ 0.83
Csmd1Q923L3 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.24■□□□□ 0.83
Csmd1Q923L3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Csmd1Q923L3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Csmd1Q923L3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Csmd1Q923L3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Csmd1Q923L3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Csmd1Q923L3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Csmd1Q923L3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Csmd1Q923L3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.22■□□□□ 0.83
Csmd1Q923L3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Csmd1Q923L3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Csmd1Q923L3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.21■□□□□ 0.83
Csmd1Q923L3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Csmd1Q923L3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Csmd1Q923L3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Csmd1Q923L3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Csmd1Q923L3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.2■□□□□ 0.82
Csmd1Q923L3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Csmd1Q923L3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Csmd1Q923L3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Csmd1Q923L3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Csmd1Q923L3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Csmd1Q923L3 Gm30023-201ENSMUST00000197970 889 ntBASIC20.17■□□□□ 0.82
Csmd1Q923L3 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.17■□□□□ 0.82
Csmd1Q923L3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Csmd1Q923L3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Csmd1Q923L3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Csmd1Q923L3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Csmd1Q923L3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.16■□□□□ 0.82
Csmd1Q923L3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
Csmd1Q923L3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Csmd1Q923L3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Csmd1Q923L3 Serp2-204ENSMUST00000228055 705 ntBASIC20.15■□□□□ 0.82
Csmd1Q923L3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.15■□□□□ 0.82
Csmd1Q923L3 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.15■□□□□ 0.82
Csmd1Q923L3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Csmd1Q923L3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms