Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Slc44a3Q921V7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a3Q921V7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a3Q921V7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
Slc44a3Q921V7 Nkain2-201ENSMUST00000092602 558 ntBASIC23.31■■□□□ 1.32
Slc44a3Q921V7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a3Q921V7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Slc44a3Q921V7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.3■■□□□ 1.32
Slc44a3Q921V7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc44a3Q921V7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc44a3Q921V7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Slc44a3Q921V7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc44a3Q921V7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Slc44a3Q921V7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc44a3Q921V7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC23.27■■□□□ 1.32
Slc44a3Q921V7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Slc44a3Q921V7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.27■■□□□ 1.32
Slc44a3Q921V7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc44a3Q921V7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc44a3Q921V7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc44a3Q921V7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Slc44a3Q921V7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.26■■□□□ 1.31
Slc44a3Q921V7 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.26■■□□□ 1.31
Slc44a3Q921V7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Slc44a3Q921V7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc44a3Q921V7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.25■■□□□ 1.31
Slc44a3Q921V7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Slc44a3Q921V7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc44a3Q921V7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.23■■□□□ 1.31
Slc44a3Q921V7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc44a3Q921V7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc44a3Q921V7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc44a3Q921V7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc44a3Q921V7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Slc44a3Q921V7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.21■■□□□ 1.31
Slc44a3Q921V7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc44a3Q921V7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc44a3Q921V7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.2■■□□□ 1.3
Slc44a3Q921V7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
Slc44a3Q921V7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc44a3Q921V7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc44a3Q921V7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
Slc44a3Q921V7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Slc44a3Q921V7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Slc44a3Q921V7 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.19■■□□□ 1.3
Slc44a3Q921V7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Slc44a3Q921V7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Slc44a3Q921V7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.18■■□□□ 1.3
Slc44a3Q921V7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc44a3Q921V7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.18■■□□□ 1.3
Slc44a3Q921V7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Slc44a3Q921V7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Slc44a3Q921V7 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.17■■□□□ 1.3
Slc44a3Q921V7 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.17■■□□□ 1.3
Slc44a3Q921V7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc44a3Q921V7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Slc44a3Q921V7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.14■■□□□ 1.3
Slc44a3Q921V7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Slc44a3Q921V7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Slc44a3Q921V7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc44a3Q921V7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc44a3Q921V7 Gm6821-201ENSMUST00000107540 542 ntBASIC23.11■■□□□ 1.29
Slc44a3Q921V7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc44a3Q921V7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc44a3Q921V7 Particl-201ENSMUST00000205370 1560 ntBASIC23.1■■□□□ 1.29
Slc44a3Q921V7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc44a3Q921V7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc44a3Q921V7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Slc44a3Q921V7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.09■■□□□ 1.29
Slc44a3Q921V7 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc44a3Q921V7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.08■■□□□ 1.29
Slc44a3Q921V7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc44a3Q921V7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.07■■□□□ 1.28
Slc44a3Q921V7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.07■■□□□ 1.28
Slc44a3Q921V7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Slc44a3Q921V7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc44a3Q921V7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc44a3Q921V7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc44a3Q921V7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc44a3Q921V7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Slc44a3Q921V7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc44a3Q921V7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Slc44a3Q921V7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Slc44a3Q921V7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Slc44a3Q921V7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Slc44a3Q921V7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Slc44a3Q921V7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc44a3Q921V7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.01■■□□□ 1.27
Slc44a3Q921V7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc44a3Q921V7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23■■□□□ 1.27
Slc44a3Q921V7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Slc44a3Q921V7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms