Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhb1Q91Y08 Nkain2-201ENSMUST00000092602 558 ntBASIC24.61■■□□□ 1.53
Pcdhb1Q91Y08 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Pcdhb1Q91Y08 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb1Q91Y08 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Pcdhb1Q91Y08 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb1Q91Y08 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Pcdhb1Q91Y08 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Pcdhb1Q91Y08 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.59■■□□□ 1.53
Pcdhb1Q91Y08 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Pcdhb1Q91Y08 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Pcdhb1Q91Y08 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.57■■□□□ 1.52
Pcdhb1Q91Y08 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Pcdhb1Q91Y08 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb1Q91Y08 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Pcdhb1Q91Y08 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.56■■□□□ 1.52
Pcdhb1Q91Y08 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.55■■□□□ 1.52
Pcdhb1Q91Y08 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Pcdhb1Q91Y08 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb1Q91Y08 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Pcdhb1Q91Y08 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.54■■□□□ 1.52
Pcdhb1Q91Y08 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Pcdhb1Q91Y08 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
Pcdhb1Q91Y08 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb1Q91Y08 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb1Q91Y08 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Pcdhb1Q91Y08 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.53■■□□□ 1.52
Pcdhb1Q91Y08 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.53■■□□□ 1.52
Pcdhb1Q91Y08 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.53■■□□□ 1.52
Pcdhb1Q91Y08 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb1Q91Y08 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
Pcdhb1Q91Y08 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Pcdhb1Q91Y08 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Pcdhb1Q91Y08 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Pcdhb1Q91Y08 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.5■■□□□ 1.51
Pcdhb1Q91Y08 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Pcdhb1Q91Y08 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.5■■□□□ 1.51
Pcdhb1Q91Y08 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Pcdhb1Q91Y08 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Pcdhb1Q91Y08 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Pcdhb1Q91Y08 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Pcdhb1Q91Y08 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.47■■□□□ 1.51
Pcdhb1Q91Y08 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.46■■□□□ 1.51
Pcdhb1Q91Y08 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.46■■□□□ 1.51
Pcdhb1Q91Y08 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.46■■□□□ 1.51
Pcdhb1Q91Y08 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb1Q91Y08 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb1Q91Y08 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Pcdhb1Q91Y08 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Pcdhb1Q91Y08 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Pcdhb1Q91Y08 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Pcdhb1Q91Y08 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb1Q91Y08 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pcdhb1Q91Y08 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.43■■□□□ 1.5
Pcdhb1Q91Y08 Particl-201ENSMUST00000205370 1560 ntBASIC24.43■■□□□ 1.5
Pcdhb1Q91Y08 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb1Q91Y08 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb1Q91Y08 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pcdhb1Q91Y08 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.42■■□□□ 1.5
Pcdhb1Q91Y08 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.42■■□□□ 1.5
Pcdhb1Q91Y08 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
Pcdhb1Q91Y08 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pcdhb1Q91Y08 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb1Q91Y08 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Pcdhb1Q91Y08 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb1Q91Y08 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb1Q91Y08 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb1Q91Y08 Gm6821-201ENSMUST00000107540 542 ntBASIC24.36■■□□□ 1.49
Pcdhb1Q91Y08 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Pcdhb1Q91Y08 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhb1Q91Y08 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Pcdhb1Q91Y08 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb1Q91Y08 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.32■■□□□ 1.48
Pcdhb1Q91Y08 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb1Q91Y08 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb1Q91Y08 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb1Q91Y08 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb1Q91Y08 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb1Q91Y08 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb1Q91Y08 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.29■■□□□ 1.48
Pcdhb1Q91Y08 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.29■■□□□ 1.48
Pcdhb1Q91Y08 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Pcdhb1Q91Y08 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb1Q91Y08 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb1Q91Y08 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb1Q91Y08 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb1Q91Y08 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb1Q91Y08 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb1Q91Y08 Gm8503-201ENSMUST00000118131 455 ntBASIC24.27■■□□□ 1.48
Pcdhb1Q91Y08 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pcdhb1Q91Y08 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pcdhb1Q91Y08 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms