Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdhgb4Q91XX6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.94■■□□□ 1.58
Pcdhgb4Q91XX6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdhgb4Q91XX6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.94■■□□□ 1.58
Pcdhgb4Q91XX6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhgb4Q91XX6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhgb4Q91XX6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.93■■□□□ 1.58
Pcdhgb4Q91XX6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.93■■□□□ 1.58
Pcdhgb4Q91XX6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Pcdhgb4Q91XX6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
Pcdhgb4Q91XX6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgb4Q91XX6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgb4Q91XX6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgb4Q91XX6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdhgb4Q91XX6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhgb4Q91XX6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.91■■□□□ 1.58
Pcdhgb4Q91XX6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhgb4Q91XX6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhgb4Q91XX6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdhgb4Q91XX6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgb4Q91XX6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgb4Q91XX6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Pcdhgb4Q91XX6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhgb4Q91XX6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhgb4Q91XX6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdhgb4Q91XX6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Pcdhgb4Q91XX6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgb4Q91XX6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdhgb4Q91XX6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgb4Q91XX6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Pcdhgb4Q91XX6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.86■■□□□ 1.57
Pcdhgb4Q91XX6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhgb4Q91XX6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Pcdhgb4Q91XX6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhgb4Q91XX6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhgb4Q91XX6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
Pcdhgb4Q91XX6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhgb4Q91XX6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
Pcdhgb4Q91XX6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Pcdhgb4Q91XX6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhgb4Q91XX6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhgb4Q91XX6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhgb4Q91XX6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Pcdhgb4Q91XX6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhgb4Q91XX6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.8■■□□□ 1.56
Pcdhgb4Q91XX6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhgb4Q91XX6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhgb4Q91XX6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Pcdhgb4Q91XX6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Pcdhgb4Q91XX6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Pcdhgb4Q91XX6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Pcdhgb4Q91XX6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Pcdhgb4Q91XX6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgb4Q91XX6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
Pcdhgb4Q91XX6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgb4Q91XX6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgb4Q91XX6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Pcdhgb4Q91XX6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Pcdhgb4Q91XX6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.74■■□□□ 1.55
Pcdhgb4Q91XX6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Pcdhgb4Q91XX6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgb4Q91XX6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgb4Q91XX6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Pcdhgb4Q91XX6 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.72■■□□□ 1.55
Pcdhgb4Q91XX6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
Pcdhgb4Q91XX6 Nkain2-201ENSMUST00000092602 558 ntBASIC24.72■■□□□ 1.55
Pcdhgb4Q91XX6 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.71■■□□□ 1.55
Pcdhgb4Q91XX6 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.71■■□□□ 1.55
Pcdhgb4Q91XX6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgb4Q91XX6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgb4Q91XX6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.71■■□□□ 1.55
Pcdhgb4Q91XX6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.71■■□□□ 1.55
Pcdhgb4Q91XX6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Pcdhgb4Q91XX6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
Pcdhgb4Q91XX6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Pcdhgb4Q91XX6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Pcdhgb4Q91XX6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.69■■□□□ 1.54
Pcdhgb4Q91XX6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgb4Q91XX6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.68■■□□□ 1.54
Pcdhgb4Q91XX6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.68■■□□□ 1.54
Pcdhgb4Q91XX6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Pcdhgb4Q91XX6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.67■■□□□ 1.54
Pcdhgb4Q91XX6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhgb4Q91XX6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.67■■□□□ 1.54
Pcdhgb4Q91XX6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhgb4Q91XX6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Pcdhgb4Q91XX6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Pcdhgb4Q91XX6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Pcdhgb4Q91XX6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb4Q91XX6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb4Q91XX6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Pcdhgb4Q91XX6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Pcdhgb4Q91XX6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Pcdhgb4Q91XX6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Pcdhgb4Q91XX6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Pcdhgb4Q91XX6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Pcdhgb4Q91XX6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Pcdhgb4Q91XX6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.61■■□□□ 1.53
Pcdhgb4Q91XX6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Pcdhgb4Q91XX6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms