Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rab40cQ8VHQ4 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.16■□□□□ 0.66
Rab40cQ8VHQ4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40cQ8VHQ4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rab40cQ8VHQ4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40cQ8VHQ4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40cQ8VHQ4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40cQ8VHQ4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40cQ8VHQ4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40cQ8VHQ4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rab40cQ8VHQ4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab40cQ8VHQ4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rab40cQ8VHQ4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Rab40cQ8VHQ4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40cQ8VHQ4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.11■□□□□ 0.65
Rab40cQ8VHQ4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40cQ8VHQ4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab40cQ8VHQ4 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rab40cQ8VHQ4 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab40cQ8VHQ4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40cQ8VHQ4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40cQ8VHQ4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Rab40cQ8VHQ4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40cQ8VHQ4 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rab40cQ8VHQ4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rab40cQ8VHQ4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.08■□□□□ 0.64
Rab40cQ8VHQ4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab40cQ8VHQ4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rab40cQ8VHQ4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab40cQ8VHQ4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab40cQ8VHQ4 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rab40cQ8VHQ4 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab40cQ8VHQ4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab40cQ8VHQ4 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab40cQ8VHQ4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rab40cQ8VHQ4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab40cQ8VHQ4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab40cQ8VHQ4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.06■□□□□ 0.64
Rab40cQ8VHQ4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rab40cQ8VHQ4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40cQ8VHQ4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40cQ8VHQ4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40cQ8VHQ4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rab40cQ8VHQ4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40cQ8VHQ4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rab40cQ8VHQ4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab40cQ8VHQ4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Rab40cQ8VHQ4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Rab40cQ8VHQ4 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab40cQ8VHQ4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab40cQ8VHQ4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.03■□□□□ 0.64
Rab40cQ8VHQ4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rab40cQ8VHQ4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Rab40cQ8VHQ4 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.02■□□□□ 0.64
Rab40cQ8VHQ4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Rab40cQ8VHQ4 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rab40cQ8VHQ4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Rab40cQ8VHQ4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Rab40cQ8VHQ4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab40cQ8VHQ4 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Rab40cQ8VHQ4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab40cQ8VHQ4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Rab40cQ8VHQ4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab40cQ8VHQ4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Rab40cQ8VHQ4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Rab40cQ8VHQ4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40cQ8VHQ4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40cQ8VHQ4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40cQ8VHQ4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40cQ8VHQ4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40cQ8VHQ4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Rab40cQ8VHQ4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rab40cQ8VHQ4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40cQ8VHQ4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Rab40cQ8VHQ4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rab40cQ8VHQ4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rab40cQ8VHQ4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40cQ8VHQ4 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40cQ8VHQ4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40cQ8VHQ4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Rab40cQ8VHQ4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40cQ8VHQ4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rab40cQ8VHQ4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40cQ8VHQ4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40cQ8VHQ4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40cQ8VHQ4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Rab40cQ8VHQ4 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40cQ8VHQ4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rab40cQ8VHQ4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
Rab40cQ8VHQ4 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.94■□□□□ 0.62
Rab40cQ8VHQ4 Gm16148-201ENSMUST00000119653 893 ntBASIC18.94■□□□□ 0.62
Rab40cQ8VHQ4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms