Protein–RNA interactions for Protein: Q8VH37

Hdac8, Histone deacetylase 8, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac8Q8VH37 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Hdac8Q8VH37 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Hdac8Q8VH37 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hdac8Q8VH37 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hdac8Q8VH37 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Hdac8Q8VH37 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Hdac8Q8VH37 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Hdac8Q8VH37 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.32■■□□□ 1.32
Hdac8Q8VH37 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Hdac8Q8VH37 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hdac8Q8VH37 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.31■■□□□ 1.32
Hdac8Q8VH37 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Hdac8Q8VH37 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
Hdac8Q8VH37 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Hdac8Q8VH37 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Hdac8Q8VH37 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.29■■□□□ 1.32
Hdac8Q8VH37 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Hdac8Q8VH37 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Hdac8Q8VH37 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.29■■□□□ 1.32
Hdac8Q8VH37 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Hdac8Q8VH37 Amer2-203ENSMUST00000225247 2662 ntBASIC23.29■■□□□ 1.32
Hdac8Q8VH37 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Hdac8Q8VH37 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Hdac8Q8VH37 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Hdac8Q8VH37 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Hdac8Q8VH37 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Hdac8Q8VH37 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Hdac8Q8VH37 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.26■■□□□ 1.31
Hdac8Q8VH37 Gm37136-201ENSMUST00000194368 194 ntBASIC23.26■■□□□ 1.31
Hdac8Q8VH37 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Hdac8Q8VH37 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Hdac8Q8VH37 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hdac8Q8VH37 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Hdac8Q8VH37 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Hdac8Q8VH37 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hdac8Q8VH37 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.23■■□□□ 1.31
Hdac8Q8VH37 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Hdac8Q8VH37 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Hdac8Q8VH37 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Hdac8Q8VH37 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Hdac8Q8VH37 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Hdac8Q8VH37 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Hdac8Q8VH37 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Hdac8Q8VH37 Gm6311-201ENSMUST00000073790 878 ntBASIC23.2■■□□□ 1.3
Hdac8Q8VH37 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Hdac8Q8VH37 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Hdac8Q8VH37 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Hdac8Q8VH37 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Hdac8Q8VH37 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.18■■□□□ 1.3
Hdac8Q8VH37 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Hdac8Q8VH37 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Hdac8Q8VH37 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Hdac8Q8VH37 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Hdac8Q8VH37 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Hdac8Q8VH37 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Hdac8Q8VH37 Gm4799-201ENSMUST00000095396 657 ntBASIC23.15■■□□□ 1.3
Hdac8Q8VH37 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Hdac8Q8VH37 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Hdac8Q8VH37 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.13■■□□□ 1.29
Hdac8Q8VH37 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.13■■□□□ 1.29
Hdac8Q8VH37 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC23.13■■□□□ 1.29
Hdac8Q8VH37 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Hdac8Q8VH37 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.13■■□□□ 1.29
Hdac8Q8VH37 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.12■■□□□ 1.29
Hdac8Q8VH37 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.12■■□□□ 1.29
Hdac8Q8VH37 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.1■■□□□ 1.29
Hdac8Q8VH37 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Hdac8Q8VH37 Gm11175-201ENSMUST00000116172 543 ntBASIC23.09■■□□□ 1.29
Hdac8Q8VH37 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.09■■□□□ 1.29
Hdac8Q8VH37 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.09■■□□□ 1.29
Hdac8Q8VH37 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Hdac8Q8VH37 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Hdac8Q8VH37 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.08■■□□□ 1.28
Hdac8Q8VH37 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hdac8Q8VH37 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Hdac8Q8VH37 Mir3960-201ENSMUST00000198213 73 ntBASIC23.07■■□□□ 1.28
Hdac8Q8VH37 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.07■■□□□ 1.28
Hdac8Q8VH37 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hdac8Q8VH37 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hdac8Q8VH37 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Hdac8Q8VH37 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Hdac8Q8VH37 Mir6538-201ENSMUST00000183713 110 ntBASIC23.05■■□□□ 1.28
Hdac8Q8VH37 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Hdac8Q8VH37 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Hdac8Q8VH37 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.05■■□□□ 1.28
Hdac8Q8VH37 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.05■■□□□ 1.28
Hdac8Q8VH37 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.04■■□□□ 1.28
Hdac8Q8VH37 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Hdac8Q8VH37 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hdac8Q8VH37 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Hdac8Q8VH37 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Hdac8Q8VH37 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hdac8Q8VH37 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Hdac8Q8VH37 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Hdac8Q8VH37 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Hdac8Q8VH37 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23■■□□□ 1.27
Hdac8Q8VH37 Pkd1-207ENSMUST00000228550 1050 ntBASIC23■■□□□ 1.27
Hdac8Q8VH37 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.99■■□□□ 1.27
Hdac8Q8VH37 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.99■■□□□ 1.27
Hdac8Q8VH37 Gm45364-201ENSMUST00000210883 159 ntBASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms