Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.28■■□□□ 1.32
Slc6a20aQ8VDB9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.28■■□□□ 1.32
Slc6a20aQ8VDB9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Slc6a20aQ8VDB9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Slc6a20aQ8VDB9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Slc6a20aQ8VDB9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc6a20aQ8VDB9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a20aQ8VDB9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a20aQ8VDB9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Slc6a20aQ8VDB9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Slc6a20aQ8VDB9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20aQ8VDB9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20aQ8VDB9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20aQ8VDB9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20aQ8VDB9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc6a20aQ8VDB9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Slc6a20aQ8VDB9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.24■■□□□ 1.31
Slc6a20aQ8VDB9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Slc6a20aQ8VDB9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Slc6a20aQ8VDB9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc6a20aQ8VDB9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Slc6a20aQ8VDB9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a20aQ8VDB9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.22■■□□□ 1.31
Slc6a20aQ8VDB9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a20aQ8VDB9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
Slc6a20aQ8VDB9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Slc6a20aQ8VDB9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc6a20aQ8VDB9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc6a20aQ8VDB9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc6a20aQ8VDB9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc6a20aQ8VDB9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc6a20aQ8VDB9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
Slc6a20aQ8VDB9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc6a20aQ8VDB9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc6a20aQ8VDB9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc6a20aQ8VDB9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc6a20aQ8VDB9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc6a20aQ8VDB9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc6a20aQ8VDB9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Slc6a20aQ8VDB9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.14■■□□□ 1.3
Slc6a20aQ8VDB9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Slc6a20aQ8VDB9 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC23.14■■□□□ 1.29
Slc6a20aQ8VDB9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Slc6a20aQ8VDB9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc6a20aQ8VDB9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc6a20aQ8VDB9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc6a20aQ8VDB9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
Slc6a20aQ8VDB9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Slc6a20aQ8VDB9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc6a20aQ8VDB9 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc6a20aQ8VDB9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc6a20aQ8VDB9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Slc6a20aQ8VDB9 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.12■■□□□ 1.29
Slc6a20aQ8VDB9 Nkain2-201ENSMUST00000092602 558 ntBASIC23.12■■□□□ 1.29
Slc6a20aQ8VDB9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc6a20aQ8VDB9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Slc6a20aQ8VDB9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slc6a20aQ8VDB9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc6a20aQ8VDB9 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.11■■□□□ 1.29
Slc6a20aQ8VDB9 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.11■■□□□ 1.29
Slc6a20aQ8VDB9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Slc6a20aQ8VDB9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Slc6a20aQ8VDB9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.09■■□□□ 1.29
Slc6a20aQ8VDB9 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.09■■□□□ 1.29
Slc6a20aQ8VDB9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc6a20aQ8VDB9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc6a20aQ8VDB9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.07■■□□□ 1.28
Slc6a20aQ8VDB9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc6a20aQ8VDB9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc6a20aQ8VDB9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc6a20aQ8VDB9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc6a20aQ8VDB9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.06■■□□□ 1.28
Slc6a20aQ8VDB9 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc6a20aQ8VDB9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Slc6a20aQ8VDB9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc6a20aQ8VDB9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc6a20aQ8VDB9 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Slc6a20aQ8VDB9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Slc6a20aQ8VDB9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.04■■□□□ 1.28
Slc6a20aQ8VDB9 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc6a20aQ8VDB9 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc6a20aQ8VDB9 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.02■■□□□ 1.28
Slc6a20aQ8VDB9 Particl-201ENSMUST00000205370 1560 ntBASIC23.02■■□□□ 1.28
Slc6a20aQ8VDB9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.02■■□□□ 1.28
Slc6a20aQ8VDB9 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc6a20aQ8VDB9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Slc6a20aQ8VDB9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Slc6a20aQ8VDB9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc6a20aQ8VDB9 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc6a20aQ8VDB9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.01■■□□□ 1.27
Slc6a20aQ8VDB9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc6a20aQ8VDB9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Slc6a20aQ8VDB9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Slc6a20aQ8VDB9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Slc6a20aQ8VDB9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc6a20aQ8VDB9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Slc6a20aQ8VDB9 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.99■■□□□ 1.27
Slc6a20aQ8VDB9 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc6a20aQ8VDB9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc6a20aQ8VDB9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms