Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sft2d2Q8VD57 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sft2d2Q8VD57 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sft2d2Q8VD57 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sft2d2Q8VD57 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sft2d2Q8VD57 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sft2d2Q8VD57 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Sft2d2Q8VD57 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sft2d2Q8VD57 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Sft2d2Q8VD57 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Sft2d2Q8VD57 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.95■□□□□ 0.62
Sft2d2Q8VD57 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Sft2d2Q8VD57 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sft2d2Q8VD57 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sft2d2Q8VD57 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sft2d2Q8VD57 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sft2d2Q8VD57 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sft2d2Q8VD57 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sft2d2Q8VD57 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sft2d2Q8VD57 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sft2d2Q8VD57 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sft2d2Q8VD57 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sft2d2Q8VD57 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sft2d2Q8VD57 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sft2d2Q8VD57 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sft2d2Q8VD57 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sft2d2Q8VD57 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sft2d2Q8VD57 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Sft2d2Q8VD57 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sft2d2Q8VD57 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.62
Sft2d2Q8VD57 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sft2d2Q8VD57 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sft2d2Q8VD57 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sft2d2Q8VD57 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sft2d2Q8VD57 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sft2d2Q8VD57 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.88■□□□□ 0.61
Sft2d2Q8VD57 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sft2d2Q8VD57 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sft2d2Q8VD57 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Sft2d2Q8VD57 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.87■□□□□ 0.61
Sft2d2Q8VD57 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sft2d2Q8VD57 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sft2d2Q8VD57 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sft2d2Q8VD57 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sft2d2Q8VD57 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sft2d2Q8VD57 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sft2d2Q8VD57 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sft2d2Q8VD57 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sft2d2Q8VD57 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sft2d2Q8VD57 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sft2d2Q8VD57 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sft2d2Q8VD57 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sft2d2Q8VD57 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sft2d2Q8VD57 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sft2d2Q8VD57 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
Sft2d2Q8VD57 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sft2d2Q8VD57 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sft2d2Q8VD57 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sft2d2Q8VD57 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sft2d2Q8VD57 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d2Q8VD57 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d2Q8VD57 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d2Q8VD57 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d2Q8VD57 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sft2d2Q8VD57 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.81■□□□□ 0.6
Sft2d2Q8VD57 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d2Q8VD57 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d2Q8VD57 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sft2d2Q8VD57 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sft2d2Q8VD57 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sft2d2Q8VD57 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.8■□□□□ 0.6
Sft2d2Q8VD57 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sft2d2Q8VD57 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sft2d2Q8VD57 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.8■□□□□ 0.6
Sft2d2Q8VD57 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sft2d2Q8VD57 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms