Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Chrna3Q8R4G9 Particl-201ENSMUST00000205370 1560 ntBASIC23.21■■□□□ 1.31
Chrna3Q8R4G9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Chrna3Q8R4G9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Chrna3Q8R4G9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Chrna3Q8R4G9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Chrna3Q8R4G9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Chrna3Q8R4G9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.19■■□□□ 1.3
Chrna3Q8R4G9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.18■■□□□ 1.3
Chrna3Q8R4G9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Chrna3Q8R4G9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chrna3Q8R4G9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chrna3Q8R4G9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
Chrna3Q8R4G9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Chrna3Q8R4G9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Chrna3Q8R4G9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chrna3Q8R4G9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Chrna3Q8R4G9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chrna3Q8R4G9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Chrna3Q8R4G9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chrna3Q8R4G9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Chrna3Q8R4G9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.15■■□□□ 1.3
Chrna3Q8R4G9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
Chrna3Q8R4G9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Chrna3Q8R4G9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Chrna3Q8R4G9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Chrna3Q8R4G9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Chrna3Q8R4G9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Chrna3Q8R4G9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.09■■□□□ 1.29
Chrna3Q8R4G9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chrna3Q8R4G9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chrna3Q8R4G9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Chrna3Q8R4G9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Chrna3Q8R4G9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Chrna3Q8R4G9 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.07■■□□□ 1.28
Chrna3Q8R4G9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Chrna3Q8R4G9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Chrna3Q8R4G9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Chrna3Q8R4G9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Chrna3Q8R4G9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Chrna3Q8R4G9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.04■■□□□ 1.28
Chrna3Q8R4G9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.04■■□□□ 1.28
Chrna3Q8R4G9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.04■■□□□ 1.28
Chrna3Q8R4G9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Chrna3Q8R4G9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Chrna3Q8R4G9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Chrna3Q8R4G9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Chrna3Q8R4G9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.01■■□□□ 1.27
Chrna3Q8R4G9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chrna3Q8R4G9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Chrna3Q8R4G9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Chrna3Q8R4G9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Chrna3Q8R4G9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Chrna3Q8R4G9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Chrna3Q8R4G9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Chrna3Q8R4G9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Chrna3Q8R4G9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chrna3Q8R4G9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Chrna3Q8R4G9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Chrna3Q8R4G9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Chrna3Q8R4G9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Chrna3Q8R4G9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Chrna3Q8R4G9 Gm37136-201ENSMUST00000194368 194 ntBASIC22.92■■□□□ 1.26
Chrna3Q8R4G9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Chrna3Q8R4G9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.91■■□□□ 1.26
Chrna3Q8R4G9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.91■■□□□ 1.26
Chrna3Q8R4G9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.91■■□□□ 1.26
Chrna3Q8R4G9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Chrna3Q8R4G9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Chrna3Q8R4G9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.9■■□□□ 1.26
Chrna3Q8R4G9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Chrna3Q8R4G9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Chrna3Q8R4G9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Chrna3Q8R4G9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Chrna3Q8R4G9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chrna3Q8R4G9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Chrna3Q8R4G9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chrna3Q8R4G9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.88■■□□□ 1.25
Chrna3Q8R4G9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Chrna3Q8R4G9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Chrna3Q8R4G9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Chrna3Q8R4G9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chrna3Q8R4G9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Chrna3Q8R4G9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Chrna3Q8R4G9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Chrna3Q8R4G9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Chrna3Q8R4G9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.83■■□□□ 1.25
Chrna3Q8R4G9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Chrna3Q8R4G9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Chrna3Q8R4G9 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.82■■□□□ 1.24
Chrna3Q8R4G9 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.82■■□□□ 1.24
Chrna3Q8R4G9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Chrna3Q8R4G9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.82■■□□□ 1.24
Chrna3Q8R4G9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Chrna3Q8R4G9 Gm4799-201ENSMUST00000095396 657 ntBASIC22.82■■□□□ 1.24
Chrna3Q8R4G9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Chrna3Q8R4G9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Chrna3Q8R4G9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Chrna3Q8R4G9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Chrna3Q8R4G9 Gm6311-201ENSMUST00000073790 878 ntBASIC22.8■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms