Protein–RNA interactions for Protein: Q8K301

Ddx52, Probable ATP-dependent RNA helicase DDX52, mousemouse

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx52Q8K301 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Ddx52Q8K301 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ddx52Q8K301 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.71■■□□□ 1.23
Ddx52Q8K301 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.71■■□□□ 1.23
Ddx52Q8K301 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ddx52Q8K301 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx52Q8K301 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ddx52Q8K301 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ddx52Q8K301 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
Ddx52Q8K301 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx52Q8K301 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx52Q8K301 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.68■■□□□ 1.22
Ddx52Q8K301 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx52Q8K301 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ddx52Q8K301 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Ddx52Q8K301 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx52Q8K301 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx52Q8K301 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.67■■□□□ 1.22
Ddx52Q8K301 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx52Q8K301 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ddx52Q8K301 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.66■■□□□ 1.22
Ddx52Q8K301 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ddx52Q8K301 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx52Q8K301 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Ddx52Q8K301 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.65■■□□□ 1.22
Ddx52Q8K301 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.65■■□□□ 1.22
Ddx52Q8K301 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.22
Ddx52Q8K301 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Ddx52Q8K301 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.63■■□□□ 1.21
Ddx52Q8K301 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx52Q8K301 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx52Q8K301 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ddx52Q8K301 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.62■■□□□ 1.21
Ddx52Q8K301 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ddx52Q8K301 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ddx52Q8K301 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.6■■□□□ 1.21
Ddx52Q8K301 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx52Q8K301 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx52Q8K301 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ddx52Q8K301 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.58■■□□□ 1.21
Ddx52Q8K301 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.58■■□□□ 1.21
Ddx52Q8K301 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.57■■□□□ 1.2
Ddx52Q8K301 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Ddx52Q8K301 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx52Q8K301 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx52Q8K301 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.56■■□□□ 1.2
Ddx52Q8K301 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ddx52Q8K301 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx52Q8K301 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.55■■□□□ 1.2
Ddx52Q8K301 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx52Q8K301 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ddx52Q8K301 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx52Q8K301 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx52Q8K301 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx52Q8K301 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx52Q8K301 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ddx52Q8K301 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.53■■□□□ 1.2
Ddx52Q8K301 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ddx52Q8K301 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx52Q8K301 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ddx52Q8K301 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx52Q8K301 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Ddx52Q8K301 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx52Q8K301 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx52Q8K301 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx52Q8K301 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx52Q8K301 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Ddx52Q8K301 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx52Q8K301 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx52Q8K301 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.48■■□□□ 1.19
Ddx52Q8K301 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Ddx52Q8K301 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx52Q8K301 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx52Q8K301 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx52Q8K301 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx52Q8K301 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx52Q8K301 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx52Q8K301 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx52Q8K301 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Ddx52Q8K301 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx52Q8K301 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx52Q8K301 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx52Q8K301 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Ddx52Q8K301 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx52Q8K301 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ddx52Q8K301 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx52Q8K301 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ddx52Q8K301 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
Ddx52Q8K301 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx52Q8K301 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.42■■□□□ 1.18
Ddx52Q8K301 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ddx52Q8K301 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx52Q8K301 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx52Q8K301 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx52Q8K301 Particl-201ENSMUST00000205370 1560 ntBASIC22.41■■□□□ 1.18
Ddx52Q8K301 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ddx52Q8K301 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx52Q8K301 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ddx52Q8K301 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Ddx52Q8K301 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms