Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC27.1■■□□□ 1.93
Depdc1aQ8CIG0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Depdc1aQ8CIG0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Depdc1aQ8CIG0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Depdc1aQ8CIG0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.09■■□□□ 1.93
Depdc1aQ8CIG0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
Depdc1aQ8CIG0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Depdc1aQ8CIG0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Depdc1aQ8CIG0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.05■■□□□ 1.92
Depdc1aQ8CIG0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Depdc1aQ8CIG0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.03■■□□□ 1.92
Depdc1aQ8CIG0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Depdc1aQ8CIG0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Depdc1aQ8CIG0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Depdc1aQ8CIG0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Depdc1aQ8CIG0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Depdc1aQ8CIG0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Depdc1aQ8CIG0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.01■■□□□ 1.91
Depdc1aQ8CIG0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.01■■□□□ 1.91
Depdc1aQ8CIG0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Depdc1aQ8CIG0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
Depdc1aQ8CIG0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Depdc1aQ8CIG0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Depdc1aQ8CIG0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Depdc1aQ8CIG0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
Depdc1aQ8CIG0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Depdc1aQ8CIG0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Depdc1aQ8CIG0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.97■■□□□ 1.91
Depdc1aQ8CIG0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Depdc1aQ8CIG0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.96■■□□□ 1.91
Depdc1aQ8CIG0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Depdc1aQ8CIG0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.91
Depdc1aQ8CIG0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Depdc1aQ8CIG0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC26.93■■□□□ 1.9
Depdc1aQ8CIG0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Depdc1aQ8CIG0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.93■■□□□ 1.9
Depdc1aQ8CIG0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Depdc1aQ8CIG0 Gm37136-201ENSMUST00000194368 194 ntBASIC26.92■■□□□ 1.9
Depdc1aQ8CIG0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Depdc1aQ8CIG0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Depdc1aQ8CIG0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Depdc1aQ8CIG0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Depdc1aQ8CIG0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Depdc1aQ8CIG0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Depdc1aQ8CIG0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
Depdc1aQ8CIG0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
Depdc1aQ8CIG0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Depdc1aQ8CIG0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Depdc1aQ8CIG0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Depdc1aQ8CIG0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC26.83■■□□□ 1.89
Depdc1aQ8CIG0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Depdc1aQ8CIG0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.82■■□□□ 1.88
Depdc1aQ8CIG0 Gm6311-201ENSMUST00000073790 878 ntBASIC26.82■■□□□ 1.88
Depdc1aQ8CIG0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Depdc1aQ8CIG0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Depdc1aQ8CIG0 Gm11175-201ENSMUST00000116172 543 ntBASIC26.81■■□□□ 1.88
Depdc1aQ8CIG0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.81■■□□□ 1.88
Depdc1aQ8CIG0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
Depdc1aQ8CIG0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
Depdc1aQ8CIG0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Depdc1aQ8CIG0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
Depdc1aQ8CIG0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.8■■□□□ 1.88
Depdc1aQ8CIG0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Depdc1aQ8CIG0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Depdc1aQ8CIG0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC26.78■■□□□ 1.88
Depdc1aQ8CIG0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Depdc1aQ8CIG0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Depdc1aQ8CIG0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.76■■□□□ 1.87
Depdc1aQ8CIG0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Depdc1aQ8CIG0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Depdc1aQ8CIG0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Depdc1aQ8CIG0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Depdc1aQ8CIG0 Gm4799-201ENSMUST00000095396 657 ntBASIC26.73■■□□□ 1.87
Depdc1aQ8CIG0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC26.73■■□□□ 1.87
Depdc1aQ8CIG0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Depdc1aQ8CIG0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Depdc1aQ8CIG0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
Depdc1aQ8CIG0 Gm37847-201ENSMUST00000192163 1497 ntBASIC26.7■■□□□ 1.87
Depdc1aQ8CIG0 Gm31748-201ENSMUST00000194938 1497 ntBASIC26.7■■□□□ 1.87
Depdc1aQ8CIG0 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.7■■□□□ 1.86
Depdc1aQ8CIG0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.69■■□□□ 1.86
Depdc1aQ8CIG0 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.69■■□□□ 1.86
Depdc1aQ8CIG0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26.69■■□□□ 1.86
Depdc1aQ8CIG0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.69■■□□□ 1.86
Depdc1aQ8CIG0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Depdc1aQ8CIG0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Depdc1aQ8CIG0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.67■■□□□ 1.86
Depdc1aQ8CIG0 Mir3960-201ENSMUST00000198213 73 ntBASIC26.67■■□□□ 1.86
Depdc1aQ8CIG0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Depdc1aQ8CIG0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Depdc1aQ8CIG0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Depdc1aQ8CIG0 Gm14121-201ENSMUST00000121441 1380 ntBASIC26.66■■□□□ 1.86
Depdc1aQ8CIG0 Gm45364-201ENSMUST00000210883 159 ntBASIC26.65■■□□□ 1.86
Depdc1aQ8CIG0 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.65■■□□□ 1.86
Depdc1aQ8CIG0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.65■■□□□ 1.86
Depdc1aQ8CIG0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Depdc1aQ8CIG0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Depdc1aQ8CIG0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Depdc1aQ8CIG0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Depdc1aQ8CIG0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms