Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Prpf31Q8CCF0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Prpf31Q8CCF0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Prpf31Q8CCF0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Prpf31Q8CCF0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
Prpf31Q8CCF0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
Prpf31Q8CCF0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Prpf31Q8CCF0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Prpf31Q8CCF0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.92■■□□□ 1.74
Prpf31Q8CCF0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Prpf31Q8CCF0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
Prpf31Q8CCF0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Prpf31Q8CCF0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.74
Prpf31Q8CCF0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Prpf31Q8CCF0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.88■■□□□ 1.73
Prpf31Q8CCF0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Prpf31Q8CCF0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Prpf31Q8CCF0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Prpf31Q8CCF0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Prpf31Q8CCF0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Prpf31Q8CCF0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Prpf31Q8CCF0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Prpf31Q8CCF0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Prpf31Q8CCF0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC25.83■■□□□ 1.73
Prpf31Q8CCF0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Prpf31Q8CCF0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Prpf31Q8CCF0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf31Q8CCF0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf31Q8CCF0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Prpf31Q8CCF0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.81■■□□□ 1.72
Prpf31Q8CCF0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Prpf31Q8CCF0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
Prpf31Q8CCF0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.8■■□□□ 1.72
Prpf31Q8CCF0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Prpf31Q8CCF0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC25.78■■□□□ 1.72
Prpf31Q8CCF0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.78■■□□□ 1.72
Prpf31Q8CCF0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Prpf31Q8CCF0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Prpf31Q8CCF0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf31Q8CCF0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Prpf31Q8CCF0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Prpf31Q8CCF0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Prpf31Q8CCF0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.75■■□□□ 1.71
Prpf31Q8CCF0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Prpf31Q8CCF0 Gm37136-201ENSMUST00000194368 194 ntBASIC25.74■■□□□ 1.71
Prpf31Q8CCF0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Prpf31Q8CCF0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Prpf31Q8CCF0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Prpf31Q8CCF0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.72■■□□□ 1.71
Prpf31Q8CCF0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Prpf31Q8CCF0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
Prpf31Q8CCF0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Prpf31Q8CCF0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Prpf31Q8CCF0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Prpf31Q8CCF0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Prpf31Q8CCF0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Prpf31Q8CCF0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Prpf31Q8CCF0 Gm6311-201ENSMUST00000073790 878 ntBASIC25.66■■□□□ 1.7
Prpf31Q8CCF0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Prpf31Q8CCF0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Prpf31Q8CCF0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Prpf31Q8CCF0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.64■■□□□ 1.7
Prpf31Q8CCF0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.64■■□□□ 1.7
Prpf31Q8CCF0 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Prpf31Q8CCF0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Prpf31Q8CCF0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.62■■□□□ 1.69
Prpf31Q8CCF0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
Prpf31Q8CCF0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Prpf31Q8CCF0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Prpf31Q8CCF0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
Prpf31Q8CCF0 Gm4799-201ENSMUST00000095396 657 ntBASIC25.61■■□□□ 1.69
Prpf31Q8CCF0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.6■■□□□ 1.69
Prpf31Q8CCF0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf31Q8CCF0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Prpf31Q8CCF0 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.59■■□□□ 1.69
Prpf31Q8CCF0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Prpf31Q8CCF0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.59■■□□□ 1.69
Prpf31Q8CCF0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Prpf31Q8CCF0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
Prpf31Q8CCF0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.57■■□□□ 1.68
Prpf31Q8CCF0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC25.57■■□□□ 1.68
Prpf31Q8CCF0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Prpf31Q8CCF0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.57■■□□□ 1.68
Prpf31Q8CCF0 Gm11175-201ENSMUST00000116172 543 ntBASIC25.56■■□□□ 1.68
Prpf31Q8CCF0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Prpf31Q8CCF0 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.55■■□□□ 1.68
Prpf31Q8CCF0 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.55■■□□□ 1.68
Prpf31Q8CCF0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
Prpf31Q8CCF0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Prpf31Q8CCF0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Prpf31Q8CCF0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.53■■□□□ 1.68
Prpf31Q8CCF0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf31Q8CCF0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Prpf31Q8CCF0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Prpf31Q8CCF0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Prpf31Q8CCF0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Prpf31Q8CCF0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.5■■□□□ 1.67
Prpf31Q8CCF0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Prpf31Q8CCF0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Prpf31Q8CCF0 Mir3960-201ENSMUST00000198213 73 ntBASIC25.5■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms