Protein–RNA interactions for Protein: Q8CBM3

Gm16223, MCG145574 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm16223Q8CBM3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gm16223Q8CBM3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gm16223Q8CBM3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm16223Q8CBM3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gm16223Q8CBM3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Gm16223Q8CBM3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gm16223Q8CBM3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.9■□□□□ 0.3
Gm16223Q8CBM3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm16223Q8CBM3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gm16223Q8CBM3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gm16223Q8CBM3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm16223Q8CBM3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gm16223Q8CBM3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm16223Q8CBM3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm16223Q8CBM3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.88■□□□□ 0.29
Gm16223Q8CBM3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gm16223Q8CBM3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gm16223Q8CBM3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.87■□□□□ 0.29
Gm16223Q8CBM3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Gm16223Q8CBM3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm16223Q8CBM3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Gm16223Q8CBM3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gm16223Q8CBM3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gm16223Q8CBM3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm16223Q8CBM3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm16223Q8CBM3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm16223Q8CBM3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm16223Q8CBM3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm16223Q8CBM3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm16223Q8CBM3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Gm16223Q8CBM3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm16223Q8CBM3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Gm16223Q8CBM3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm16223Q8CBM3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm16223Q8CBM3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm16223Q8CBM3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm16223Q8CBM3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm16223Q8CBM3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm16223Q8CBM3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm16223Q8CBM3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm16223Q8CBM3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm16223Q8CBM3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm16223Q8CBM3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm16223Q8CBM3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm16223Q8CBM3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Gm16223Q8CBM3 Gm16148-201ENSMUST00000119653 893 ntBASIC16.82■□□□□ 0.28
Gm16223Q8CBM3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm16223Q8CBM3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.81■□□□□ 0.28
Gm16223Q8CBM3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm16223Q8CBM3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Gm16223Q8CBM3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm16223Q8CBM3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gm16223Q8CBM3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.8■□□□□ 0.28
Gm16223Q8CBM3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Gm24804-201ENSMUST00000174982 85 ntBASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Gm16223Q8CBM3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm16223Q8CBM3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm16223Q8CBM3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm16223Q8CBM3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm16223Q8CBM3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm16223Q8CBM3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Gm16223Q8CBM3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.78■□□□□ 0.28
Gm16223Q8CBM3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Gm16223Q8CBM3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Gm16223Q8CBM3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Gm16223Q8CBM3 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.77■□□□□ 0.27
Gm16223Q8CBM3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Gm16223Q8CBM3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm16223Q8CBM3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm16223Q8CBM3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Gm16223Q8CBM3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Gm16223Q8CBM3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm16223Q8CBM3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Gm16223Q8CBM3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.75■□□□□ 0.27
Gm16223Q8CBM3 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Gm16223Q8CBM3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm16223Q8CBM3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Gm16223Q8CBM3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Gm16223Q8CBM3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16223Q8CBM3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16223Q8CBM3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16223Q8CBM3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16223Q8CBM3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16223Q8CBM3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16223Q8CBM3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16223Q8CBM3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Gm16223Q8CBM3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC16.73■□□□□ 0.27
Gm16223Q8CBM3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm16223Q8CBM3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Gm16223Q8CBM3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm16223Q8CBM3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Gm16223Q8CBM3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms