Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cpne1Q8C166 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cpne1Q8C166 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Cpne1Q8C166 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Cpne1Q8C166 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
Cpne1Q8C166 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
Cpne1Q8C166 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.99■■□□□ 1.11
Cpne1Q8C166 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.99■■□□□ 1.11
Cpne1Q8C166 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpne1Q8C166 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cpne1Q8C166 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.99■■□□□ 1.11
Cpne1Q8C166 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cpne1Q8C166 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cpne1Q8C166 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cpne1Q8C166 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cpne1Q8C166 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
Cpne1Q8C166 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpne1Q8C166 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpne1Q8C166 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cpne1Q8C166 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Cpne1Q8C166 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cpne1Q8C166 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cpne1Q8C166 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.95■■□□□ 1.1
Cpne1Q8C166 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.95■■□□□ 1.1
Cpne1Q8C166 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.94■■□□□ 1.1
Cpne1Q8C166 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Cpne1Q8C166 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Cpne1Q8C166 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.93■■□□□ 1.1
Cpne1Q8C166 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cpne1Q8C166 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cpne1Q8C166 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cpne1Q8C166 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne1Q8C166 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.9■■□□□ 1.1
Cpne1Q8C166 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpne1Q8C166 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.9■■□□□ 1.1
Cpne1Q8C166 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpne1Q8C166 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpne1Q8C166 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Cpne1Q8C166 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.88■■□□□ 1.09
Cpne1Q8C166 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpne1Q8C166 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cpne1Q8C166 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpne1Q8C166 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cpne1Q8C166 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cpne1Q8C166 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cpne1Q8C166 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Cpne1Q8C166 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cpne1Q8C166 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.86■■□□□ 1.09
Cpne1Q8C166 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cpne1Q8C166 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpne1Q8C166 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpne1Q8C166 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cpne1Q8C166 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpne1Q8C166 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cpne1Q8C166 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cpne1Q8C166 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Cpne1Q8C166 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cpne1Q8C166 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cpne1Q8C166 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.82■■□□□ 1.08
Cpne1Q8C166 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.81■■□□□ 1.08
Cpne1Q8C166 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Cpne1Q8C166 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Cpne1Q8C166 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Cpne1Q8C166 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cpne1Q8C166 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cpne1Q8C166 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cpne1Q8C166 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Cpne1Q8C166 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cpne1Q8C166 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cpne1Q8C166 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cpne1Q8C166 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cpne1Q8C166 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.78■■□□□ 1.08
Cpne1Q8C166 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpne1Q8C166 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpne1Q8C166 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpne1Q8C166 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cpne1Q8C166 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cpne1Q8C166 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cpne1Q8C166 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Cpne1Q8C166 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cpne1Q8C166 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cpne1Q8C166 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Cpne1Q8C166 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Cpne1Q8C166 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpne1Q8C166 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpne1Q8C166 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.73■■□□□ 1.07
Cpne1Q8C166 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpne1Q8C166 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpne1Q8C166 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cpne1Q8C166 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Cpne1Q8C166 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cpne1Q8C166 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cpne1Q8C166 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.72■■□□□ 1.07
Cpne1Q8C166 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cpne1Q8C166 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne1Q8C166 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpne1Q8C166 Particl-201ENSMUST00000205370 1560 ntBASIC21.7■■□□□ 1.06
Cpne1Q8C166 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpne1Q8C166 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cpne1Q8C166 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms