Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsfm13Q8BXS2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsfm13Q8BXS2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Tnfsfm13Q8BXS2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsfm13Q8BXS2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfsfm13Q8BXS2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsfm13Q8BXS2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsfm13Q8BXS2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsfm13Q8BXS2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Tnfsfm13Q8BXS2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Tnfsfm13Q8BXS2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsfm13Q8BXS2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsfm13Q8BXS2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsfm13Q8BXS2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsfm13Q8BXS2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Tnfsfm13Q8BXS2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tnfsfm13Q8BXS2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsfm13Q8BXS2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.79■□□□□ 0.92
Tnfsfm13Q8BXS2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Tnfsfm13Q8BXS2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsfm13Q8BXS2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsfm13Q8BXS2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Tnfsfm13Q8BXS2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfsfm13Q8BXS2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Gm30023-201ENSMUST00000197970 889 ntBASIC20.75■□□□□ 0.91
Tnfsfm13Q8BXS2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsfm13Q8BXS2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Tnfsfm13Q8BXS2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfsfm13Q8BXS2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfsfm13Q8BXS2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsfm13Q8BXS2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfsfm13Q8BXS2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.69■□□□□ 0.9
Tnfsfm13Q8BXS2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsfm13Q8BXS2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsfm13Q8BXS2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.64■□□□□ 0.9
Tnfsfm13Q8BXS2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Tnfsfm13Q8BXS2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsfm13Q8BXS2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.62■□□□□ 0.89
Tnfsfm13Q8BXS2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsfm13Q8BXS2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms