Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tnfsfm13Q8BXS2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tnfsfm13Q8BXS2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsfm13Q8BXS2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Tnfsfm13Q8BXS2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tnfsfm13Q8BXS2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tnfsfm13Q8BXS2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsfm13Q8BXS2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsfm13Q8BXS2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tnfsfm13Q8BXS2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Tnfsfm13Q8BXS2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Tnfsfm13Q8BXS2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsfm13Q8BXS2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tnfsfm13Q8BXS2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsfm13Q8BXS2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tnfsfm13Q8BXS2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Tnfsfm13Q8BXS2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tnfsfm13Q8BXS2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tnfsfm13Q8BXS2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.79■□□□□ 0.92
Tnfsfm13Q8BXS2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Tnfsfm13Q8BXS2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsfm13Q8BXS2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tnfsfm13Q8BXS2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Tnfsfm13Q8BXS2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tnfsfm13Q8BXS2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tnfsfm13Q8BXS2 Gm30023-201ENSMUST00000197970 889 ntBASIC20.75■□□□□ 0.91
Tnfsfm13Q8BXS2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tnfsfm13Q8BXS2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tnfsfm13Q8BXS2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tnfsfm13Q8BXS2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Tnfsfm13Q8BXS2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnfsfm13Q8BXS2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnfsfm13Q8BXS2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnfsfm13Q8BXS2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfsfm13Q8BXS2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnfsfm13Q8BXS2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.69■□□□□ 0.9
Tnfsfm13Q8BXS2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.69■□□□□ 0.9
Tnfsfm13Q8BXS2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Tnfsfm13Q8BXS2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsfm13Q8BXS2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnfsfm13Q8BXS2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnfsfm13Q8BXS2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnfsfm13Q8BXS2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.64■□□□□ 0.9
Tnfsfm13Q8BXS2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnfsfm13Q8BXS2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Tnfsfm13Q8BXS2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsfm13Q8BXS2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.62■□□□□ 0.89
Tnfsfm13Q8BXS2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnfsfm13Q8BXS2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms