Protein–RNA interactions for Protein: Q8BVF7

Aph1a, Gamma-secretase subunit APH-1A, mousemouse

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1aQ8BVF7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aph1aQ8BVF7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Aph1aQ8BVF7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Aph1aQ8BVF7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.83■□□□□ 0.93
Aph1aQ8BVF7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Aph1aQ8BVF7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Aph1aQ8BVF7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.82■□□□□ 0.92
Aph1aQ8BVF7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Aph1aQ8BVF7 Particl-201ENSMUST00000205370 1560 ntBASIC20.8■□□□□ 0.92
Aph1aQ8BVF7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Aph1aQ8BVF7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Aph1aQ8BVF7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Aph1aQ8BVF7 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.8■□□□□ 0.92
Aph1aQ8BVF7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Aph1aQ8BVF7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Aph1aQ8BVF7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
Aph1aQ8BVF7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.78■□□□□ 0.92
Aph1aQ8BVF7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.77■□□□□ 0.92
Aph1aQ8BVF7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Aph1aQ8BVF7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.76■□□□□ 0.91
Aph1aQ8BVF7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.76■□□□□ 0.91
Aph1aQ8BVF7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Aph1aQ8BVF7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Aph1aQ8BVF7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.75■□□□□ 0.91
Aph1aQ8BVF7 Gm11599-201ENSMUST00000118720 878 ntBASIC20.74■□□□□ 0.91
Aph1aQ8BVF7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.74■□□□□ 0.91
Aph1aQ8BVF7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.74■□□□□ 0.91
Aph1aQ8BVF7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.73■□□□□ 0.91
Aph1aQ8BVF7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Aph1aQ8BVF7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.73■□□□□ 0.91
Aph1aQ8BVF7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aph1aQ8BVF7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Aph1aQ8BVF7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Aph1aQ8BVF7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.71■□□□□ 0.91
Aph1aQ8BVF7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Aph1aQ8BVF7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Aph1aQ8BVF7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Aph1aQ8BVF7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Aph1aQ8BVF7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Aph1aQ8BVF7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Aph1aQ8BVF7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Aph1aQ8BVF7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Aph1aQ8BVF7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Aph1aQ8BVF7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Aph1aQ8BVF7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Aph1aQ8BVF7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Aph1aQ8BVF7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Aph1aQ8BVF7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Aph1aQ8BVF7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1aQ8BVF7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Aph1aQ8BVF7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1aQ8BVF7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1aQ8BVF7 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.62■□□□□ 0.89
Aph1aQ8BVF7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Aph1aQ8BVF7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Aph1aQ8BVF7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aph1aQ8BVF7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Aph1aQ8BVF7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aph1aQ8BVF7 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.6■□□□□ 0.89
Aph1aQ8BVF7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Aph1aQ8BVF7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Aph1aQ8BVF7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.59■□□□□ 0.89
Aph1aQ8BVF7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Aph1aQ8BVF7 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1aQ8BVF7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Aph1aQ8BVF7 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.56■□□□□ 0.88
Aph1aQ8BVF7 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.56■□□□□ 0.88
Aph1aQ8BVF7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1aQ8BVF7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1aQ8BVF7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1aQ8BVF7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Aph1aQ8BVF7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.56■□□□□ 0.88
Aph1aQ8BVF7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1aQ8BVF7 Gm37136-201ENSMUST00000194368 194 ntBASIC20.55■□□□□ 0.88
Aph1aQ8BVF7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Aph1aQ8BVF7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.55■□□□□ 0.88
Aph1aQ8BVF7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1aQ8BVF7 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1aQ8BVF7 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.53■□□□□ 0.88
Aph1aQ8BVF7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1aQ8BVF7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Aph1aQ8BVF7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.53■□□□□ 0.88
Aph1aQ8BVF7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aph1aQ8BVF7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aph1aQ8BVF7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Aph1aQ8BVF7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Aph1aQ8BVF7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1aQ8BVF7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1aQ8BVF7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1aQ8BVF7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1aQ8BVF7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1aQ8BVF7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Aph1aQ8BVF7 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Aph1aQ8BVF7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aph1aQ8BVF7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Aph1aQ8BVF7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Aph1aQ8BVF7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1aQ8BVF7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Aph1aQ8BVF7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Aph1aQ8BVF7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms