Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cpne3Q8BT60 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cpne3Q8BT60 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cpne3Q8BT60 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Cpne3Q8BT60 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cpne3Q8BT60 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cpne3Q8BT60 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.56■■□□□ 1.2
Cpne3Q8BT60 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cpne3Q8BT60 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cpne3Q8BT60 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cpne3Q8BT60 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cpne3Q8BT60 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cpne3Q8BT60 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cpne3Q8BT60 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Cpne3Q8BT60 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Cpne3Q8BT60 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cpne3Q8BT60 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Cpne3Q8BT60 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Cpne3Q8BT60 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.5■■□□□ 1.19
Cpne3Q8BT60 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.5■■□□□ 1.19
Cpne3Q8BT60 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cpne3Q8BT60 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Cpne3Q8BT60 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cpne3Q8BT60 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Cpne3Q8BT60 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.49■■□□□ 1.19
Cpne3Q8BT60 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Cpne3Q8BT60 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cpne3Q8BT60 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Cpne3Q8BT60 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cpne3Q8BT60 Gm30023-201ENSMUST00000197970 889 ntBASIC22.48■■□□□ 1.19
Cpne3Q8BT60 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Cpne3Q8BT60 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC22.48■■□□□ 1.19
Cpne3Q8BT60 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.47■■□□□ 1.19
Cpne3Q8BT60 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cpne3Q8BT60 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Cpne3Q8BT60 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Cpne3Q8BT60 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Cpne3Q8BT60 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cpne3Q8BT60 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Cpne3Q8BT60 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
Cpne3Q8BT60 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Cpne3Q8BT60 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Cpne3Q8BT60 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cpne3Q8BT60 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cpne3Q8BT60 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Cpne3Q8BT60 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Cpne3Q8BT60 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.42■■□□□ 1.18
Cpne3Q8BT60 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Cpne3Q8BT60 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Cpne3Q8BT60 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Cpne3Q8BT60 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Cpne3Q8BT60 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.41■■□□□ 1.18
Cpne3Q8BT60 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Cpne3Q8BT60 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cpne3Q8BT60 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cpne3Q8BT60 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cpne3Q8BT60 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Cpne3Q8BT60 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Cpne3Q8BT60 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Cpne3Q8BT60 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cpne3Q8BT60 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cpne3Q8BT60 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cpne3Q8BT60 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.37■■□□□ 1.17
Cpne3Q8BT60 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cpne3Q8BT60 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cpne3Q8BT60 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cpne3Q8BT60 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Cpne3Q8BT60 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpne3Q8BT60 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpne3Q8BT60 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
Cpne3Q8BT60 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.35■■□□□ 1.17
Cpne3Q8BT60 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpne3Q8BT60 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cpne3Q8BT60 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpne3Q8BT60 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cpne3Q8BT60 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Cpne3Q8BT60 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.33■■□□□ 1.17
Cpne3Q8BT60 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Cpne3Q8BT60 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cpne3Q8BT60 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpne3Q8BT60 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpne3Q8BT60 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpne3Q8BT60 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms