Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ppp1r3eQ8BRJ4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Ppp1r3eQ8BRJ4 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.16■■□□□ 1.14
Ppp1r3eQ8BRJ4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.16■■□□□ 1.14
Ppp1r3eQ8BRJ4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.16■■□□□ 1.14
Ppp1r3eQ8BRJ4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Ppp1r3eQ8BRJ4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ppp1r3eQ8BRJ4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ppp1r3eQ8BRJ4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ppp1r3eQ8BRJ4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ppp1r3eQ8BRJ4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ppp1r3eQ8BRJ4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ppp1r3eQ8BRJ4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ppp1r3eQ8BRJ4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ppp1r3eQ8BRJ4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ppp1r3eQ8BRJ4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.14■■□□□ 1.14
Ppp1r3eQ8BRJ4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ppp1r3eQ8BRJ4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ppp1r3eQ8BRJ4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ppp1r3eQ8BRJ4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ppp1r3eQ8BRJ4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp1r3eQ8BRJ4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Ppp1r3eQ8BRJ4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Ppp1r3eQ8BRJ4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.12■■□□□ 1.13
Ppp1r3eQ8BRJ4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ppp1r3eQ8BRJ4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp1r3eQ8BRJ4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp1r3eQ8BRJ4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp1r3eQ8BRJ4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ppp1r3eQ8BRJ4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ppp1r3eQ8BRJ4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ppp1r3eQ8BRJ4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
Ppp1r3eQ8BRJ4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Ppp1r3eQ8BRJ4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ppp1r3eQ8BRJ4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ppp1r3eQ8BRJ4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ppp1r3eQ8BRJ4 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Ppp1r3eQ8BRJ4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Ppp1r3eQ8BRJ4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ppp1r3eQ8BRJ4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ppp1r3eQ8BRJ4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ppp1r3eQ8BRJ4 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.06■■□□□ 1.12
Ppp1r3eQ8BRJ4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.06■■□□□ 1.12
Ppp1r3eQ8BRJ4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ppp1r3eQ8BRJ4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ppp1r3eQ8BRJ4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ppp1r3eQ8BRJ4 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.05■■□□□ 1.12
Ppp1r3eQ8BRJ4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ppp1r3eQ8BRJ4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Ppp1r3eQ8BRJ4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ppp1r3eQ8BRJ4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ppp1r3eQ8BRJ4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ppp1r3eQ8BRJ4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ppp1r3eQ8BRJ4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ppp1r3eQ8BRJ4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ppp1r3eQ8BRJ4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ppp1r3eQ8BRJ4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ppp1r3eQ8BRJ4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.11
Ppp1r3eQ8BRJ4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ppp1r3eQ8BRJ4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
Ppp1r3eQ8BRJ4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Ppp1r3eQ8BRJ4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ppp1r3eQ8BRJ4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ppp1r3eQ8BRJ4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ppp1r3eQ8BRJ4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.98■■□□□ 1.11
Ppp1r3eQ8BRJ4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.98■■□□□ 1.11
Ppp1r3eQ8BRJ4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ppp1r3eQ8BRJ4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ppp1r3eQ8BRJ4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp1r3eQ8BRJ4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp1r3eQ8BRJ4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp1r3eQ8BRJ4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ppp1r3eQ8BRJ4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Ppp1r3eQ8BRJ4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.11
Ppp1r3eQ8BRJ4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ppp1r3eQ8BRJ4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ppp1r3eQ8BRJ4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.95■■□□□ 1.1
Ppp1r3eQ8BRJ4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ppp1r3eQ8BRJ4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ppp1r3eQ8BRJ4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ppp1r3eQ8BRJ4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ppp1r3eQ8BRJ4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.94■■□□□ 1.1
Ppp1r3eQ8BRJ4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Ppp1r3eQ8BRJ4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Ppp1r3eQ8BRJ4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ppp1r3eQ8BRJ4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.92■■□□□ 1.1
Ppp1r3eQ8BRJ4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ppp1r3eQ8BRJ4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ppp1r3eQ8BRJ4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ppp1r3eQ8BRJ4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.92■■□□□ 1.1
Ppp1r3eQ8BRJ4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Ppp1r3eQ8BRJ4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ppp1r3eQ8BRJ4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Ppp1r3eQ8BRJ4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ppp1r3eQ8BRJ4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ppp1r3eQ8BRJ4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ppp1r3eQ8BRJ4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ppp1r3eQ8BRJ4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ppp1r3eQ8BRJ4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.9■■□□□ 1.1
Ppp1r3eQ8BRJ4 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms