Protein–RNA interactions for Protein: Q8BP97

Rhbdd3, Rhomboid domain-containing protein 3, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdd3Q8BP97 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rhbdd3Q8BP97 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rhbdd3Q8BP97 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rhbdd3Q8BP97 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rhbdd3Q8BP97 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rhbdd3Q8BP97 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.43■■□□□ 1.02
Rhbdd3Q8BP97 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rhbdd3Q8BP97 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Rhbdd3Q8BP97 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rhbdd3Q8BP97 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Rhbdd3Q8BP97 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rhbdd3Q8BP97 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rhbdd3Q8BP97 Gm30023-201ENSMUST00000197970 889 ntBASIC21.42■■□□□ 1.02
Rhbdd3Q8BP97 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rhbdd3Q8BP97 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rhbdd3Q8BP97 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rhbdd3Q8BP97 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rhbdd3Q8BP97 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Rhbdd3Q8BP97 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rhbdd3Q8BP97 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Rhbdd3Q8BP97 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rhbdd3Q8BP97 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rhbdd3Q8BP97 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rhbdd3Q8BP97 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rhbdd3Q8BP97 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rhbdd3Q8BP97 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Rhbdd3Q8BP97 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rhbdd3Q8BP97 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rhbdd3Q8BP97 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rhbdd3Q8BP97 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.36■■□□□ 1.01
Rhbdd3Q8BP97 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rhbdd3Q8BP97 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rhbdd3Q8BP97 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rhbdd3Q8BP97 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rhbdd3Q8BP97 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rhbdd3Q8BP97 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rhbdd3Q8BP97 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.34■■□□□ 1.01
Rhbdd3Q8BP97 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.34■■□□□ 1.01
Rhbdd3Q8BP97 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rhbdd3Q8BP97 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rhbdd3Q8BP97 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Rhbdd3Q8BP97 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rhbdd3Q8BP97 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rhbdd3Q8BP97 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rhbdd3Q8BP97 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rhbdd3Q8BP97 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Rhbdd3Q8BP97 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rhbdd3Q8BP97 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rhbdd3Q8BP97 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rhbdd3Q8BP97 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
Rhbdd3Q8BP97 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.29■■□□□ 1
Rhbdd3Q8BP97 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.29■■□□□ 1
Rhbdd3Q8BP97 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Rhbdd3Q8BP97 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rhbdd3Q8BP97 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Rhbdd3Q8BP97 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rhbdd3Q8BP97 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.27■■□□□ 1
Rhbdd3Q8BP97 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rhbdd3Q8BP97 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rhbdd3Q8BP97 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rhbdd3Q8BP97 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rhbdd3Q8BP97 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.26■□□□□ 0.99
Rhbdd3Q8BP97 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rhbdd3Q8BP97 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rhbdd3Q8BP97 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rhbdd3Q8BP97 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Rhbdd3Q8BP97 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.25■□□□□ 0.99
Rhbdd3Q8BP97 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rhbdd3Q8BP97 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rhbdd3Q8BP97 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.24■□□□□ 0.99
Rhbdd3Q8BP97 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rhbdd3Q8BP97 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rhbdd3Q8BP97 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rhbdd3Q8BP97 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Rhbdd3Q8BP97 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rhbdd3Q8BP97 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rhbdd3Q8BP97 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rhbdd3Q8BP97 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rhbdd3Q8BP97 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rhbdd3Q8BP97 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rhbdd3Q8BP97 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rhbdd3Q8BP97 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rhbdd3Q8BP97 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rhbdd3Q8BP97 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rhbdd3Q8BP97 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rhbdd3Q8BP97 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rhbdd3Q8BP97 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rhbdd3Q8BP97 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rhbdd3Q8BP97 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rhbdd3Q8BP97 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.2■□□□□ 0.98
Rhbdd3Q8BP97 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.2■□□□□ 0.98
Rhbdd3Q8BP97 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms