Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.2■□□□□ 0.82
Cdkl3Q8BLF2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cdkl3Q8BLF2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Cdkl3Q8BLF2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkl3Q8BLF2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl3Q8BLF2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl3Q8BLF2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdkl3Q8BLF2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdkl3Q8BLF2 Gm27322-201ENSMUST00000184007 104 ntBASIC20.18■□□□□ 0.82
Cdkl3Q8BLF2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl3Q8BLF2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Cdkl3Q8BLF2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkl3Q8BLF2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl3Q8BLF2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Cdkl3Q8BLF2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkl3Q8BLF2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cdkl3Q8BLF2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdkl3Q8BLF2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl3Q8BLF2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkl3Q8BLF2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl3Q8BLF2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkl3Q8BLF2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cdkl3Q8BLF2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cdkl3Q8BLF2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl3Q8BLF2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl3Q8BLF2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl3Q8BLF2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
Cdkl3Q8BLF2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkl3Q8BLF2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl3Q8BLF2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl3Q8BLF2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.12■□□□□ 0.81
Cdkl3Q8BLF2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl3Q8BLF2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl3Q8BLF2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdkl3Q8BLF2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.11■□□□□ 0.81
Cdkl3Q8BLF2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl3Q8BLF2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkl3Q8BLF2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl3Q8BLF2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl3Q8BLF2 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.1■□□□□ 0.81
Cdkl3Q8BLF2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl3Q8BLF2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl3Q8BLF2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkl3Q8BLF2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl3Q8BLF2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Cdkl3Q8BLF2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl3Q8BLF2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl3Q8BLF2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl3Q8BLF2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl3Q8BLF2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl3Q8BLF2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkl3Q8BLF2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cdkl3Q8BLF2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Cdkl3Q8BLF2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdkl3Q8BLF2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdkl3Q8BLF2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdkl3Q8BLF2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Cdkl3Q8BLF2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl3Q8BLF2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl3Q8BLF2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl3Q8BLF2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.07■□□□□ 0.8
Cdkl3Q8BLF2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl3Q8BLF2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkl3Q8BLF2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl3Q8BLF2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl3Q8BLF2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl3Q8BLF2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl3Q8BLF2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl3Q8BLF2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkl3Q8BLF2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl3Q8BLF2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkl3Q8BLF2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl3Q8BLF2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl3Q8BLF2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl3Q8BLF2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl3Q8BLF2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.04■□□□□ 0.8
Cdkl3Q8BLF2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl3Q8BLF2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cdkl3Q8BLF2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl3Q8BLF2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.03■□□□□ 0.8
Cdkl3Q8BLF2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkl3Q8BLF2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cdkl3Q8BLF2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkl3Q8BLF2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkl3Q8BLF2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkl3Q8BLF2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdkl3Q8BLF2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cdkl3Q8BLF2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl3Q8BLF2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl3Q8BLF2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl3Q8BLF2 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl3Q8BLF2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl3Q8BLF2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkl3Q8BLF2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cdkl3Q8BLF2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cdkl3Q8BLF2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl3Q8BLF2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl3Q8BLF2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkl3Q8BLF2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdkl3Q8BLF2 Gm26115-201ENSMUST00000175605 87 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms