Protein–RNA interactions for Protein: Q8BJU2

Tspan9, Tetraspanin-9, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan9Q8BJU2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tspan9Q8BJU2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tspan9Q8BJU2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tspan9Q8BJU2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan9Q8BJU2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan9Q8BJU2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Tspan9Q8BJU2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Tspan9Q8BJU2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan9Q8BJU2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan9Q8BJU2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tspan9Q8BJU2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.68■□□□□ 0.9
Tspan9Q8BJU2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan9Q8BJU2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan9Q8BJU2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan9Q8BJU2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan9Q8BJU2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan9Q8BJU2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tspan9Q8BJU2 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.67■□□□□ 0.9
Tspan9Q8BJU2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan9Q8BJU2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Tspan9Q8BJU2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan9Q8BJU2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan9Q8BJU2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Tspan9Q8BJU2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.66■□□□□ 0.9
Tspan9Q8BJU2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tspan9Q8BJU2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan9Q8BJU2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan9Q8BJU2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan9Q8BJU2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan9Q8BJU2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tspan9Q8BJU2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.64■□□□□ 0.9
Tspan9Q8BJU2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.64■□□□□ 0.9
Tspan9Q8BJU2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan9Q8BJU2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan9Q8BJU2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan9Q8BJU2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan9Q8BJU2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan9Q8BJU2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan9Q8BJU2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Tspan9Q8BJU2 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tspan9Q8BJU2 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.63■□□□□ 0.89
Tspan9Q8BJU2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.63■□□□□ 0.89
Tspan9Q8BJU2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan9Q8BJU2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan9Q8BJU2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tspan9Q8BJU2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
Tspan9Q8BJU2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan9Q8BJU2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan9Q8BJU2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tspan9Q8BJU2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Tspan9Q8BJU2 Nkain2-201ENSMUST00000092602 558 ntBASIC20.62■□□□□ 0.89
Tspan9Q8BJU2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan9Q8BJU2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan9Q8BJU2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tspan9Q8BJU2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan9Q8BJU2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan9Q8BJU2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tspan9Q8BJU2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tspan9Q8BJU2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.6■□□□□ 0.89
Tspan9Q8BJU2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.59■□□□□ 0.89
Tspan9Q8BJU2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tspan9Q8BJU2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.58■□□□□ 0.89
Tspan9Q8BJU2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tspan9Q8BJU2 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tspan9Q8BJU2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan9Q8BJU2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tspan9Q8BJU2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan9Q8BJU2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan9Q8BJU2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan9Q8BJU2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.56■□□□□ 0.88
Tspan9Q8BJU2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Tspan9Q8BJU2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan9Q8BJU2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tspan9Q8BJU2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan9Q8BJU2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan9Q8BJU2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan9Q8BJU2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan9Q8BJU2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan9Q8BJU2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan9Q8BJU2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tspan9Q8BJU2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.54■□□□□ 0.88
Tspan9Q8BJU2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan9Q8BJU2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan9Q8BJU2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tspan9Q8BJU2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan9Q8BJU2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tspan9Q8BJU2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Tspan9Q8BJU2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan9Q8BJU2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan9Q8BJU2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tspan9Q8BJU2 Gm7432-201ENSMUST00000210343 879 ntBASIC20.51■□□□□ 0.87
Tspan9Q8BJU2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan9Q8BJU2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tspan9Q8BJU2 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.51■□□□□ 0.87
Tspan9Q8BJU2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan9Q8BJU2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan9Q8BJU2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan9Q8BJU2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan9Q8BJU2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tspan9Q8BJU2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 271.8 ms