Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.89■■□□□ 1.25
Trim23Q8BGX0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.89■■□□□ 1.25
Trim23Q8BGX0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.89■■□□□ 1.25
Trim23Q8BGX0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Trim23Q8BGX0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.88■■□□□ 1.25
Trim23Q8BGX0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Trim23Q8BGX0 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.88■■□□□ 1.25
Trim23Q8BGX0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Trim23Q8BGX0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Trim23Q8BGX0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Trim23Q8BGX0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim23Q8BGX0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.84■■□□□ 1.25
Trim23Q8BGX0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trim23Q8BGX0 Particl-201ENSMUST00000205370 1560 ntBASIC22.84■■□□□ 1.25
Trim23Q8BGX0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Trim23Q8BGX0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Trim23Q8BGX0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.83■■□□□ 1.25
Trim23Q8BGX0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Trim23Q8BGX0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.81■■□□□ 1.24
Trim23Q8BGX0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Trim23Q8BGX0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.81■■□□□ 1.24
Trim23Q8BGX0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.8■■□□□ 1.24
Trim23Q8BGX0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trim23Q8BGX0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Trim23Q8BGX0 Gm11599-201ENSMUST00000118720 878 ntBASIC22.79■■□□□ 1.24
Trim23Q8BGX0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.79■■□□□ 1.24
Trim23Q8BGX0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Trim23Q8BGX0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.78■■□□□ 1.24
Trim23Q8BGX0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Trim23Q8BGX0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Trim23Q8BGX0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Trim23Q8BGX0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Trim23Q8BGX0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.73■■□□□ 1.23
Trim23Q8BGX0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trim23Q8BGX0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trim23Q8BGX0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trim23Q8BGX0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Trim23Q8BGX0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim23Q8BGX0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Trim23Q8BGX0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Trim23Q8BGX0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Trim23Q8BGX0 Gm37136-201ENSMUST00000194368 194 ntBASIC22.7■■□□□ 1.22
Trim23Q8BGX0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim23Q8BGX0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim23Q8BGX0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim23Q8BGX0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim23Q8BGX0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim23Q8BGX0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trim23Q8BGX0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim23Q8BGX0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Trim23Q8BGX0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Trim23Q8BGX0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Trim23Q8BGX0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim23Q8BGX0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim23Q8BGX0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.66■■□□□ 1.22
Trim23Q8BGX0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim23Q8BGX0 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.65■■□□□ 1.22
Trim23Q8BGX0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Trim23Q8BGX0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trim23Q8BGX0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim23Q8BGX0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim23Q8BGX0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim23Q8BGX0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim23Q8BGX0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim23Q8BGX0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim23Q8BGX0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim23Q8BGX0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim23Q8BGX0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.6■■□□□ 1.21
Trim23Q8BGX0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trim23Q8BGX0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Trim23Q8BGX0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Trim23Q8BGX0 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.6■■□□□ 1.21
Trim23Q8BGX0 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.6■■□□□ 1.21
Trim23Q8BGX0 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim23Q8BGX0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trim23Q8BGX0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Trim23Q8BGX0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trim23Q8BGX0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trim23Q8BGX0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Trim23Q8BGX0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim23Q8BGX0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Trim23Q8BGX0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trim23Q8BGX0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Trim23Q8BGX0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.56■■□□□ 1.2
Trim23Q8BGX0 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.56■■□□□ 1.2
Trim23Q8BGX0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Trim23Q8BGX0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.55■■□□□ 1.2
Trim23Q8BGX0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim23Q8BGX0 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim23Q8BGX0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim23Q8BGX0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.53■■□□□ 1.2
Trim23Q8BGX0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trim23Q8BGX0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Trim23Q8BGX0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Trim23Q8BGX0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim23Q8BGX0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim23Q8BGX0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.51■■□□□ 1.19
Trim23Q8BGX0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim23Q8BGX0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trim23Q8BGX0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms