Protein–RNA interactions for Protein: Q8BGR1

Pdzph1, MCG20355, mousemouse

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzph1Q8BGR1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
Pdzph1Q8BGR1 Gm27502-201ENSMUST00000183495 199 ntBASIC29.26■■■□□ 2.27
Pdzph1Q8BGR1 Mir3960-201ENSMUST00000198213 73 ntBASIC29.26■■■□□ 2.27
Pdzph1Q8BGR1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Pdzph1Q8BGR1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Pdzph1Q8BGR1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC29.23■■■□□ 2.27
Pdzph1Q8BGR1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pdzph1Q8BGR1 Gm45364-201ENSMUST00000210883 159 ntBASIC29.22■■■□□ 2.27
Pdzph1Q8BGR1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pdzph1Q8BGR1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Pdzph1Q8BGR1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Pdzph1Q8BGR1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pdzph1Q8BGR1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pdzph1Q8BGR1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pdzph1Q8BGR1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Pdzph1Q8BGR1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Pdzph1Q8BGR1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Pdzph1Q8BGR1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pdzph1Q8BGR1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pdzph1Q8BGR1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pdzph1Q8BGR1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC29.13■■■□□ 2.25
Pdzph1Q8BGR1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pdzph1Q8BGR1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pdzph1Q8BGR1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pdzph1Q8BGR1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC29.11■■■□□ 2.25
Pdzph1Q8BGR1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Pdzph1Q8BGR1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC29.11■■■□□ 2.25
Pdzph1Q8BGR1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pdzph1Q8BGR1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pdzph1Q8BGR1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pdzph1Q8BGR1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pdzph1Q8BGR1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.09■■■□□ 2.25
Pdzph1Q8BGR1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pdzph1Q8BGR1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.06■■■□□ 2.24
Pdzph1Q8BGR1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pdzph1Q8BGR1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29.05■■■□□ 2.24
Pdzph1Q8BGR1 Gm14523-201ENSMUST00000117260 558 ntBASIC29.04■■■□□ 2.24
Pdzph1Q8BGR1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Pdzph1Q8BGR1 Gm37136-201ENSMUST00000194368 194 ntBASIC29.03■■■□□ 2.24
Pdzph1Q8BGR1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Pdzph1Q8BGR1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pdzph1Q8BGR1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Pdzph1Q8BGR1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.02■■■□□ 2.24
Pdzph1Q8BGR1 Gm15039-201ENSMUST00000118914 875 ntBASIC29.02■■■□□ 2.24
Pdzph1Q8BGR1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.01■■■□□ 2.24
Pdzph1Q8BGR1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Pdzph1Q8BGR1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29.01■■■□□ 2.23
Pdzph1Q8BGR1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.01■■■□□ 2.23
Pdzph1Q8BGR1 Gm13889-201ENSMUST00000099689 1386 ntBASIC29.01■■■□□ 2.23
Pdzph1Q8BGR1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Pdzph1Q8BGR1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Pdzph1Q8BGR1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Pdzph1Q8BGR1 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.98■■■□□ 2.23
Pdzph1Q8BGR1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Pdzph1Q8BGR1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Pdzph1Q8BGR1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Pdzph1Q8BGR1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Pdzph1Q8BGR1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Pdzph1Q8BGR1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pdzph1Q8BGR1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Pdzph1Q8BGR1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.95■■■□□ 2.22
Pdzph1Q8BGR1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Pdzph1Q8BGR1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Pdzph1Q8BGR1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Pdzph1Q8BGR1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Pdzph1Q8BGR1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pdzph1Q8BGR1 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.91■■■□□ 2.22
Pdzph1Q8BGR1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pdzph1Q8BGR1 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.9■■■□□ 2.22
Pdzph1Q8BGR1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
Pdzph1Q8BGR1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Pdzph1Q8BGR1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
Pdzph1Q8BGR1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.89■■■□□ 2.22
Pdzph1Q8BGR1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.88■■■□□ 2.21
Pdzph1Q8BGR1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Pdzph1Q8BGR1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pdzph1Q8BGR1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.87■■■□□ 2.21
Pdzph1Q8BGR1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC28.87■■■□□ 2.21
Pdzph1Q8BGR1 Gm22567-201ENSMUST00000175542 342 ntBASIC28.87■■■□□ 2.21
Pdzph1Q8BGR1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pdzph1Q8BGR1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pdzph1Q8BGR1 Gm5812-201ENSMUST00000061073 957 ntBASIC28.86■■■□□ 2.21
Pdzph1Q8BGR1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pdzph1Q8BGR1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Pdzph1Q8BGR1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
Pdzph1Q8BGR1 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pdzph1Q8BGR1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pdzph1Q8BGR1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pdzph1Q8BGR1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Pdzph1Q8BGR1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.85■■■□□ 2.21
Pdzph1Q8BGR1 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.84■■■□□ 2.21
Pdzph1Q8BGR1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pdzph1Q8BGR1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Pdzph1Q8BGR1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pdzph1Q8BGR1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Pdzph1Q8BGR1 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pdzph1Q8BGR1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pdzph1Q8BGR1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.8■■■□□ 2.2
Pdzph1Q8BGR1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC28.8■■■□□ 2.2
Pdzph1Q8BGR1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 1373.2 ms