Protein–RNA interactions for Protein: Q8BFY6

Pef1, Peflin, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pef1Q8BFY6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pef1Q8BFY6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pef1Q8BFY6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.51■□□□□ 0.55
Pef1Q8BFY6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pef1Q8BFY6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pef1Q8BFY6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.5■□□□□ 0.55
Pef1Q8BFY6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pef1Q8BFY6 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pef1Q8BFY6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pef1Q8BFY6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pef1Q8BFY6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pef1Q8BFY6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pef1Q8BFY6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pef1Q8BFY6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pef1Q8BFY6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pef1Q8BFY6 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pef1Q8BFY6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pef1Q8BFY6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pef1Q8BFY6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pef1Q8BFY6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pef1Q8BFY6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pef1Q8BFY6 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pef1Q8BFY6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pef1Q8BFY6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.45■□□□□ 0.54
Pef1Q8BFY6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pef1Q8BFY6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pef1Q8BFY6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.45■□□□□ 0.54
Pef1Q8BFY6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pef1Q8BFY6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pef1Q8BFY6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pef1Q8BFY6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pef1Q8BFY6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Pef1Q8BFY6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Pef1Q8BFY6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Pef1Q8BFY6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pef1Q8BFY6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pef1Q8BFY6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pef1Q8BFY6 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Pef1Q8BFY6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pef1Q8BFY6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pef1Q8BFY6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pef1Q8BFY6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
Pef1Q8BFY6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Pef1Q8BFY6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pef1Q8BFY6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pef1Q8BFY6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.42■□□□□ 0.54
Pef1Q8BFY6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pef1Q8BFY6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pef1Q8BFY6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.41■□□□□ 0.54
Pef1Q8BFY6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pef1Q8BFY6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pef1Q8BFY6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pef1Q8BFY6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pef1Q8BFY6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Pef1Q8BFY6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.39■□□□□ 0.53
Pef1Q8BFY6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pef1Q8BFY6 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pef1Q8BFY6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pef1Q8BFY6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pef1Q8BFY6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pef1Q8BFY6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Pef1Q8BFY6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pef1Q8BFY6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pef1Q8BFY6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Pef1Q8BFY6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.38■□□□□ 0.53
Pef1Q8BFY6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pef1Q8BFY6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pef1Q8BFY6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pef1Q8BFY6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pef1Q8BFY6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pef1Q8BFY6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pef1Q8BFY6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pef1Q8BFY6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Pef1Q8BFY6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pef1Q8BFY6 Gm26115-201ENSMUST00000175605 87 ntBASIC18.35■□□□□ 0.53
Pef1Q8BFY6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pef1Q8BFY6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pef1Q8BFY6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pef1Q8BFY6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pef1Q8BFY6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pef1Q8BFY6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pef1Q8BFY6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pef1Q8BFY6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pef1Q8BFY6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pef1Q8BFY6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pef1Q8BFY6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pef1Q8BFY6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pef1Q8BFY6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pef1Q8BFY6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pef1Q8BFY6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pef1Q8BFY6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pef1Q8BFY6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pef1Q8BFY6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.31■□□□□ 0.52
Pef1Q8BFY6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pef1Q8BFY6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pef1Q8BFY6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pef1Q8BFY6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pef1Q8BFY6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pef1Q8BFY6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pef1Q8BFY6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms