Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.2■■□□□ 1.3
Ubp1Q811S7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ubp1Q811S7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ubp1Q811S7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ubp1Q811S7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ubp1Q811S7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubp1Q811S7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ubp1Q811S7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ubp1Q811S7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.16■■□□□ 1.3
Ubp1Q811S7 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ubp1Q811S7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubp1Q811S7 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ubp1Q811S7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ubp1Q811S7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubp1Q811S7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubp1Q811S7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubp1Q811S7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ubp1Q811S7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ubp1Q811S7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Ubp1Q811S7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ubp1Q811S7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubp1Q811S7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ubp1Q811S7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ubp1Q811S7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ubp1Q811S7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.11■■□□□ 1.29
Ubp1Q811S7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ubp1Q811S7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Ubp1Q811S7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ubp1Q811S7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubp1Q811S7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.07■■□□□ 1.28
Ubp1Q811S7 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ubp1Q811S7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ubp1Q811S7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.05■■□□□ 1.28
Ubp1Q811S7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Ubp1Q811S7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Ubp1Q811S7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ubp1Q811S7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.04■■□□□ 1.28
Ubp1Q811S7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubp1Q811S7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ubp1Q811S7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ubp1Q811S7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Ubp1Q811S7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubp1Q811S7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ubp1Q811S7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubp1Q811S7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Ubp1Q811S7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubp1Q811S7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ubp1Q811S7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ubp1Q811S7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ubp1Q811S7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ubp1Q811S7 Particl-201ENSMUST00000205370 1560 ntBASIC22.99■■□□□ 1.27
Ubp1Q811S7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ubp1Q811S7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.98■■□□□ 1.27
Ubp1Q811S7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubp1Q811S7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubp1Q811S7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ubp1Q811S7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ubp1Q811S7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.97■■□□□ 1.27
Ubp1Q811S7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ubp1Q811S7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubp1Q811S7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.96■■□□□ 1.27
Ubp1Q811S7 Gm7432-201ENSMUST00000210343 879 ntBASIC22.96■■□□□ 1.27
Ubp1Q811S7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubp1Q811S7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ubp1Q811S7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ubp1Q811S7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubp1Q811S7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Ubp1Q811S7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubp1Q811S7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubp1Q811S7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ubp1Q811S7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Ubp1Q811S7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Ubp1Q811S7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.94■■□□□ 1.26
Ubp1Q811S7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ubp1Q811S7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.93■■□□□ 1.26
Ubp1Q811S7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ubp1Q811S7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ubp1Q811S7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ubp1Q811S7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.92■■□□□ 1.26
Ubp1Q811S7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ubp1Q811S7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Ubp1Q811S7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ubp1Q811S7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ubp1Q811S7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ubp1Q811S7 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ubp1Q811S7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ubp1Q811S7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Ubp1Q811S7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.9■■□□□ 1.26
Ubp1Q811S7 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.9■■□□□ 1.26
Ubp1Q811S7 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.9■■□□□ 1.26
Ubp1Q811S7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.89■■□□□ 1.26
Ubp1Q811S7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ubp1Q811S7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.89■■□□□ 1.25
Ubp1Q811S7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ubp1Q811S7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ubp1Q811S7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.88■■□□□ 1.25
Ubp1Q811S7 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ubp1Q811S7 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.88■■□□□ 1.25
Ubp1Q811S7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Ubp1Q811S7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 138.7 ms