Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atpaf1Q811I0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Atpaf1Q811I0 Gm25262-201ENSMUST00000174934 133 ntBASIC19.21■□□□□ 0.67
Atpaf1Q811I0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atpaf1Q811I0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atpaf1Q811I0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atpaf1Q811I0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atpaf1Q811I0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atpaf1Q811I0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Atpaf1Q811I0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atpaf1Q811I0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.18■□□□□ 0.66
Atpaf1Q811I0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atpaf1Q811I0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atpaf1Q811I0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atpaf1Q811I0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atpaf1Q811I0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Atpaf1Q811I0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Atpaf1Q811I0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Atpaf1Q811I0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atpaf1Q811I0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atpaf1Q811I0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atpaf1Q811I0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Atpaf1Q811I0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atpaf1Q811I0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atpaf1Q811I0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atpaf1Q811I0 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.13■□□□□ 0.65
Atpaf1Q811I0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atpaf1Q811I0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atpaf1Q811I0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.12■□□□□ 0.65
Atpaf1Q811I0 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Atpaf1Q811I0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atpaf1Q811I0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Atpaf1Q811I0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Atpaf1Q811I0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Atpaf1Q811I0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.09■□□□□ 0.65
Atpaf1Q811I0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.09■□□□□ 0.65
Atpaf1Q811I0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atpaf1Q811I0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Atpaf1Q811I0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atpaf1Q811I0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Atpaf1Q811I0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atpaf1Q811I0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atpaf1Q811I0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Atpaf1Q811I0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.07■□□□□ 0.64
Atpaf1Q811I0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Atpaf1Q811I0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Atpaf1Q811I0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Atpaf1Q811I0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Atpaf1Q811I0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atpaf1Q811I0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Atpaf1Q811I0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Atpaf1Q811I0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Atpaf1Q811I0 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atpaf1Q811I0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atpaf1Q811I0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Atpaf1Q811I0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Atpaf1Q811I0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Atpaf1Q811I0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atpaf1Q811I0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Atpaf1Q811I0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms