Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ttc28Q80XJ3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Ttc28Q80XJ3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.43■□□□□ 0.86
Ttc28Q80XJ3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ttc28Q80XJ3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ttc28Q80XJ3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc28Q80XJ3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ttc28Q80XJ3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ttc28Q80XJ3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.4■□□□□ 0.86
Ttc28Q80XJ3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ttc28Q80XJ3 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ttc28Q80XJ3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.39■□□□□ 0.86
Ttc28Q80XJ3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ttc28Q80XJ3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ttc28Q80XJ3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ttc28Q80XJ3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc28Q80XJ3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.38■□□□□ 0.85
Ttc28Q80XJ3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ttc28Q80XJ3 Gm5812-201ENSMUST00000061073 957 ntBASIC20.37■□□□□ 0.85
Ttc28Q80XJ3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ttc28Q80XJ3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ttc28Q80XJ3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.35■□□□□ 0.85
Ttc28Q80XJ3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.34■□□□□ 0.85
Ttc28Q80XJ3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc28Q80XJ3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ttc28Q80XJ3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc28Q80XJ3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ttc28Q80XJ3 Gm14523-201ENSMUST00000117260 558 ntBASIC20.33■□□□□ 0.84
Ttc28Q80XJ3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc28Q80XJ3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ttc28Q80XJ3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.32■□□□□ 0.84
Ttc28Q80XJ3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Mir3960-201ENSMUST00000198213 73 ntBASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ttc28Q80XJ3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ttc28Q80XJ3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ttc28Q80XJ3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc28Q80XJ3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ttc28Q80XJ3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ttc28Q80XJ3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ttc28Q80XJ3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Gm27502-201ENSMUST00000183495 199 ntBASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.26■□□□□ 0.83
Ttc28Q80XJ3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ttc28Q80XJ3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ttc28Q80XJ3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ttc28Q80XJ3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.24■□□□□ 0.83
Ttc28Q80XJ3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ttc28Q80XJ3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc28Q80XJ3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc28Q80XJ3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ttc28Q80XJ3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc28Q80XJ3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ttc28Q80XJ3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ttc28Q80XJ3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.21■□□□□ 0.83
Ttc28Q80XJ3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.21■□□□□ 0.83
Ttc28Q80XJ3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ttc28Q80XJ3 Gm37136-201ENSMUST00000194368 194 ntBASIC20.21■□□□□ 0.83
Ttc28Q80XJ3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ttc28Q80XJ3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ttc28Q80XJ3 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.19■□□□□ 0.82
Ttc28Q80XJ3 Gm10420-201ENSMUST00000121713 882 ntBASIC20.19■□□□□ 0.82
Ttc28Q80XJ3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc28Q80XJ3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ttc28Q80XJ3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Ttc28Q80XJ3 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.17■□□□□ 0.82
Ttc28Q80XJ3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.17■□□□□ 0.82
Ttc28Q80XJ3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ttc28Q80XJ3 Gm5921-201ENSMUST00000075898 882 ntBASIC20.16■□□□□ 0.82
Ttc28Q80XJ3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ttc28Q80XJ3 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ttc28Q80XJ3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms