Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lrrtm4Q80XG9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.12■■□□□ 1.29
Lrrtm4Q80XG9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lrrtm4Q80XG9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Lrrtm4Q80XG9 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Lrrtm4Q80XG9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.11■■□□□ 1.29
Lrrtm4Q80XG9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lrrtm4Q80XG9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lrrtm4Q80XG9 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.09■■□□□ 1.29
Lrrtm4Q80XG9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.09■■□□□ 1.29
Lrrtm4Q80XG9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Lrrtm4Q80XG9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Lrrtm4Q80XG9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Lrrtm4Q80XG9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Lrrtm4Q80XG9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Lrrtm4Q80XG9 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Lrrtm4Q80XG9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lrrtm4Q80XG9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Lrrtm4Q80XG9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Lrrtm4Q80XG9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Lrrtm4Q80XG9 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.04■■□□□ 1.28
Lrrtm4Q80XG9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.04■■□□□ 1.28
Lrrtm4Q80XG9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lrrtm4Q80XG9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Lrrtm4Q80XG9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.27
Lrrtm4Q80XG9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Lrrtm4Q80XG9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23■■□□□ 1.27
Lrrtm4Q80XG9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lrrtm4Q80XG9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Lrrtm4Q80XG9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.98■■□□□ 1.27
Lrrtm4Q80XG9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.97■■□□□ 1.27
Lrrtm4Q80XG9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.97■■□□□ 1.27
Lrrtm4Q80XG9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.95■■□□□ 1.26
Lrrtm4Q80XG9 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lrrtm4Q80XG9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Lrrtm4Q80XG9 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Lrrtm4Q80XG9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Lrrtm4Q80XG9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrtm4Q80XG9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrtm4Q80XG9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Lrrtm4Q80XG9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Lrrtm4Q80XG9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.91■■□□□ 1.26
Lrrtm4Q80XG9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrtm4Q80XG9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lrrtm4Q80XG9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Lrrtm4Q80XG9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Lrrtm4Q80XG9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Lrrtm4Q80XG9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lrrtm4Q80XG9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Lrrtm4Q80XG9 Gm37136-201ENSMUST00000194368 194 ntBASIC22.88■■□□□ 1.25
Lrrtm4Q80XG9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lrrtm4Q80XG9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Lrrtm4Q80XG9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Lrrtm4Q80XG9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Lrrtm4Q80XG9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Lrrtm4Q80XG9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrtm4Q80XG9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Lrrtm4Q80XG9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lrrtm4Q80XG9 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.84■■□□□ 1.25
Lrrtm4Q80XG9 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.84■■□□□ 1.25
Lrrtm4Q80XG9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Lrrtm4Q80XG9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Lrrtm4Q80XG9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Lrrtm4Q80XG9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Lrrtm4Q80XG9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Lrrtm4Q80XG9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Lrrtm4Q80XG9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Lrrtm4Q80XG9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.81■■□□□ 1.24
Lrrtm4Q80XG9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Lrrtm4Q80XG9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Lrrtm4Q80XG9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Lrrtm4Q80XG9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.8■■□□□ 1.24
Lrrtm4Q80XG9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Lrrtm4Q80XG9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Lrrtm4Q80XG9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.79■■□□□ 1.24
Lrrtm4Q80XG9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.79■■□□□ 1.24
Lrrtm4Q80XG9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Lrrtm4Q80XG9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Lrrtm4Q80XG9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.78■■□□□ 1.24
Lrrtm4Q80XG9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Lrrtm4Q80XG9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.77■■□□□ 1.24
Lrrtm4Q80XG9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Lrrtm4Q80XG9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lrrtm4Q80XG9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lrrtm4Q80XG9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Lrrtm4Q80XG9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lrrtm4Q80XG9 Gm4799-201ENSMUST00000095396 657 ntBASIC22.74■■□□□ 1.23
Lrrtm4Q80XG9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Lrrtm4Q80XG9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lrrtm4Q80XG9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Lrrtm4Q80XG9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.73■■□□□ 1.23
Lrrtm4Q80XG9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Lrrtm4Q80XG9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Lrrtm4Q80XG9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Lrrtm4Q80XG9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Lrrtm4Q80XG9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Lrrtm4Q80XG9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lrrtm4Q80XG9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lrrtm4Q80XG9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Lrrtm4Q80XG9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms