Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trim36Q80WG7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim36Q80WG7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim36Q80WG7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trim36Q80WG7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim36Q80WG7 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trim36Q80WG7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trim36Q80WG7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim36Q80WG7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trim36Q80WG7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim36Q80WG7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim36Q80WG7 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trim36Q80WG7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trim36Q80WG7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Trim36Q80WG7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim36Q80WG7 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
Trim36Q80WG7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trim36Q80WG7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim36Q80WG7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trim36Q80WG7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trim36Q80WG7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim36Q80WG7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Trim36Q80WG7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim36Q80WG7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim36Q80WG7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trim36Q80WG7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim36Q80WG7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim36Q80WG7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim36Q80WG7 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.44■■□□□ 1.18
Trim36Q80WG7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim36Q80WG7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim36Q80WG7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim36Q80WG7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trim36Q80WG7 Gm8503-201ENSMUST00000118131 455 ntBASIC22.43■■□□□ 1.18
Trim36Q80WG7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Trim36Q80WG7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim36Q80WG7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim36Q80WG7 Gm6821-201ENSMUST00000107540 542 ntBASIC22.42■■□□□ 1.18
Trim36Q80WG7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim36Q80WG7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim36Q80WG7 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Trim36Q80WG7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Trim36Q80WG7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim36Q80WG7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim36Q80WG7 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim36Q80WG7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trim36Q80WG7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.39■■□□□ 1.18
Trim36Q80WG7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.39■■□□□ 1.17
Trim36Q80WG7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC22.39■■□□□ 1.17
Trim36Q80WG7 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim36Q80WG7 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim36Q80WG7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim36Q80WG7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim36Q80WG7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim36Q80WG7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim36Q80WG7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim36Q80WG7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim36Q80WG7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim36Q80WG7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim36Q80WG7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim36Q80WG7 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Trim36Q80WG7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim36Q80WG7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim36Q80WG7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim36Q80WG7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Trim36Q80WG7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Trim36Q80WG7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
Trim36Q80WG7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.34■■□□□ 1.17
Trim36Q80WG7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim36Q80WG7 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.33■■□□□ 1.17
Trim36Q80WG7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trim36Q80WG7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim36Q80WG7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim36Q80WG7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim36Q80WG7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim36Q80WG7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Trim36Q80WG7 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim36Q80WG7 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim36Q80WG7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim36Q80WG7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim36Q80WG7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim36Q80WG7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim36Q80WG7 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.29■■□□□ 1.16
Trim36Q80WG7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim36Q80WG7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim36Q80WG7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
Trim36Q80WG7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Trim36Q80WG7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim36Q80WG7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim36Q80WG7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trim36Q80WG7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Trim36Q80WG7 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim36Q80WG7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim36Q80WG7 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.26■■□□□ 1.15
Trim36Q80WG7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim36Q80WG7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Trim36Q80WG7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim36Q80WG7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim36Q80WG7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim36Q80WG7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms