Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.44■■□□□ 1.02
Ubr5Q80TP3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr5Q80TP3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.44■■□□□ 1.02
Ubr5Q80TP3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubr5Q80TP3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
Ubr5Q80TP3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubr5Q80TP3 Gm27502-201ENSMUST00000183495 199 ntBASIC21.41■■□□□ 1.02
Ubr5Q80TP3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Ubr5Q80TP3 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubr5Q80TP3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubr5Q80TP3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Ubr5Q80TP3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ubr5Q80TP3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr5Q80TP3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ubr5Q80TP3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.37■■□□□ 1.01
Ubr5Q80TP3 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.36■■□□□ 1.01
Ubr5Q80TP3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ubr5Q80TP3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.36■■□□□ 1.01
Ubr5Q80TP3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr5Q80TP3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr5Q80TP3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ubr5Q80TP3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubr5Q80TP3 Gm5921-201ENSMUST00000075898 882 ntBASIC21.35■■□□□ 1.01
Ubr5Q80TP3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr5Q80TP3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr5Q80TP3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr5Q80TP3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubr5Q80TP3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ubr5Q80TP3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Ubr5Q80TP3 Mir3960-201ENSMUST00000198213 73 ntBASIC21.32■■□□□ 1
Ubr5Q80TP3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.32■■□□□ 1
Ubr5Q80TP3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.31■■□□□ 1
Ubr5Q80TP3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ubr5Q80TP3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ubr5Q80TP3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.31■■□□□ 1
Ubr5Q80TP3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr5Q80TP3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr5Q80TP3 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.3■■□□□ 1
Ubr5Q80TP3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr5Q80TP3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubr5Q80TP3 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.29■■□□□ 1
Ubr5Q80TP3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ubr5Q80TP3 Gm15546-201ENSMUST00000122095 826 ntBASIC21.28■■□□□ 1
Ubr5Q80TP3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.28■■□□□ 1
Ubr5Q80TP3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.28■■□□□ 1
Ubr5Q80TP3 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.27■■□□□ 1
Ubr5Q80TP3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ubr5Q80TP3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubr5Q80TP3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.27■■□□□ 1
Ubr5Q80TP3 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.26■□□□□ 0.99
Ubr5Q80TP3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.26■□□□□ 0.99
Ubr5Q80TP3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubr5Q80TP3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Ubr5Q80TP3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr5Q80TP3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubr5Q80TP3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.24■□□□□ 0.99
Ubr5Q80TP3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr5Q80TP3 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.24■□□□□ 0.99
Ubr5Q80TP3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubr5Q80TP3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ubr5Q80TP3 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.23■□□□□ 0.99
Ubr5Q80TP3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ubr5Q80TP3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Ubr5Q80TP3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ubr5Q80TP3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.22■□□□□ 0.99
Ubr5Q80TP3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr5Q80TP3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ubr5Q80TP3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr5Q80TP3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr5Q80TP3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr5Q80TP3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.21■□□□□ 0.99
Ubr5Q80TP3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ubr5Q80TP3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ubr5Q80TP3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr5Q80TP3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Ubr5Q80TP3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr5Q80TP3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ubr5Q80TP3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr5Q80TP3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr5Q80TP3 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.19■□□□□ 0.98
Ubr5Q80TP3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Ubr5Q80TP3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ubr5Q80TP3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ubr5Q80TP3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ubr5Q80TP3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr5Q80TP3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr5Q80TP3 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ubr5Q80TP3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Ubr5Q80TP3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.15■□□□□ 0.98
Ubr5Q80TP3 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.15■□□□□ 0.98
Ubr5Q80TP3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr5Q80TP3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ubr5Q80TP3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.14■□□□□ 0.98
Ubr5Q80TP3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr5Q80TP3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr5Q80TP3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Ubr5Q80TP3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Ubr5Q80TP3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr5Q80TP3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ubr5Q80TP3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms