Protein–RNA interactions for Protein: Q6P6N5

Spred3, Sprouty-related, EVH1 domain-containing protein 3, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spred3Q6P6N5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Spred3Q6P6N5 Particl-201ENSMUST00000205370 1560 ntBASIC20.37■□□□□ 0.85
Spred3Q6P6N5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spred3Q6P6N5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Spred3Q6P6N5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Spred3Q6P6N5 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Spred3Q6P6N5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spred3Q6P6N5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Spred3Q6P6N5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
Spred3Q6P6N5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Spred3Q6P6N5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Spred3Q6P6N5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.32■□□□□ 0.84
Spred3Q6P6N5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.32■□□□□ 0.84
Spred3Q6P6N5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.32■□□□□ 0.84
Spred3Q6P6N5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Spred3Q6P6N5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Spred3Q6P6N5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Spred3Q6P6N5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Spred3Q6P6N5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.31■□□□□ 0.84
Spred3Q6P6N5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Spred3Q6P6N5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Spred3Q6P6N5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Spred3Q6P6N5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.29■□□□□ 0.84
Spred3Q6P6N5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Spred3Q6P6N5 Gm11599-201ENSMUST00000118720 878 ntBASIC20.27■□□□□ 0.84
Spred3Q6P6N5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Spred3Q6P6N5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.25■□□□□ 0.83
Spred3Q6P6N5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Spred3Q6P6N5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Spred3Q6P6N5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Spred3Q6P6N5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Spred3Q6P6N5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Spred3Q6P6N5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
Spred3Q6P6N5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.23■□□□□ 0.83
Spred3Q6P6N5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.23■□□□□ 0.83
Spred3Q6P6N5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Spred3Q6P6N5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spred3Q6P6N5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Spred3Q6P6N5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Spred3Q6P6N5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Spred3Q6P6N5 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spred3Q6P6N5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Spred3Q6P6N5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Spred3Q6P6N5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Spred3Q6P6N5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spred3Q6P6N5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Spred3Q6P6N5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Spred3Q6P6N5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Spred3Q6P6N5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Spred3Q6P6N5 Gm37136-201ENSMUST00000194368 194 ntBASIC20.17■□□□□ 0.82
Spred3Q6P6N5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Spred3Q6P6N5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Spred3Q6P6N5 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.16■□□□□ 0.82
Spred3Q6P6N5 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.16■□□□□ 0.82
Spred3Q6P6N5 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Spred3Q6P6N5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spred3Q6P6N5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spred3Q6P6N5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.15■□□□□ 0.82
Spred3Q6P6N5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Spred3Q6P6N5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Spred3Q6P6N5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Spred3Q6P6N5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Spred3Q6P6N5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.13■□□□□ 0.81
Spred3Q6P6N5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Spred3Q6P6N5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.13■□□□□ 0.81
Spred3Q6P6N5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Spred3Q6P6N5 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Spred3Q6P6N5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spred3Q6P6N5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spred3Q6P6N5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Spred3Q6P6N5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Spred3Q6P6N5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spred3Q6P6N5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Spred3Q6P6N5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Spred3Q6P6N5 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Spred3Q6P6N5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Spred3Q6P6N5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Spred3Q6P6N5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Spred3Q6P6N5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Spred3Q6P6N5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Spred3Q6P6N5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Spred3Q6P6N5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Spred3Q6P6N5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Spred3Q6P6N5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Spred3Q6P6N5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Spred3Q6P6N5 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Spred3Q6P6N5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Spred3Q6P6N5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Spred3Q6P6N5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Spred3Q6P6N5 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.05■□□□□ 0.8
Spred3Q6P6N5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Spred3Q6P6N5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.04■□□□□ 0.8
Spred3Q6P6N5 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.04■□□□□ 0.8
Spred3Q6P6N5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.03■□□□□ 0.8
Spred3Q6P6N5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Spred3Q6P6N5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Spred3Q6P6N5 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Spred3Q6P6N5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Spred3Q6P6N5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.02■□□□□ 0.79
Spred3Q6P6N5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms