Protein–RNA interactions for Protein: Q62261

Sptbn1, Spectrin beta chain, non-erythrocytic 1, mousemouse

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1Q62261 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sptbn1Q62261 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.39■□□□□ 0.86
Sptbn1Q62261 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn1Q62261 Gm45364-201ENSMUST00000210883 159 ntBASIC20.38■□□□□ 0.85
Sptbn1Q62261 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn1Q62261 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sptbn1Q62261 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.37■□□□□ 0.85
Sptbn1Q62261 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sptbn1Q62261 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sptbn1Q62261 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sptbn1Q62261 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.36■□□□□ 0.85
Sptbn1Q62261 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sptbn1Q62261 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sptbn1Q62261 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sptbn1Q62261 Gm10420-201ENSMUST00000121713 882 ntBASIC20.36■□□□□ 0.85
Sptbn1Q62261 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sptbn1Q62261 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sptbn1Q62261 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.34■□□□□ 0.85
Sptbn1Q62261 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sptbn1Q62261 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sptbn1Q62261 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sptbn1Q62261 Gm27502-201ENSMUST00000183495 199 ntBASIC20.33■□□□□ 0.85
Sptbn1Q62261 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sptbn1Q62261 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sptbn1Q62261 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sptbn1Q62261 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sptbn1Q62261 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sptbn1Q62261 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
Sptbn1Q62261 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.29■□□□□ 0.84
Sptbn1Q62261 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptbn1Q62261 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.29■□□□□ 0.84
Sptbn1Q62261 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sptbn1Q62261 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sptbn1Q62261 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sptbn1Q62261 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.27■□□□□ 0.83
Sptbn1Q62261 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.26■□□□□ 0.83
Sptbn1Q62261 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sptbn1Q62261 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn1Q62261 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn1Q62261 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sptbn1Q62261 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sptbn1Q62261 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Sptbn1Q62261 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Sptbn1Q62261 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sptbn1Q62261 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.22■□□□□ 0.83
Sptbn1Q62261 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptbn1Q62261 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sptbn1Q62261 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.22■□□□□ 0.83
Sptbn1Q62261 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sptbn1Q62261 Mir3960-201ENSMUST00000198213 73 ntBASIC20.21■□□□□ 0.83
Sptbn1Q62261 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptbn1Q62261 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sptbn1Q62261 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sptbn1Q62261 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sptbn1Q62261 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.2■□□□□ 0.82
Sptbn1Q62261 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sptbn1Q62261 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.19■□□□□ 0.82
Sptbn1Q62261 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sptbn1Q62261 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sptbn1Q62261 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.18■□□□□ 0.82
Sptbn1Q62261 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.18■□□□□ 0.82
Sptbn1Q62261 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sptbn1Q62261 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptbn1Q62261 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Sptbn1Q62261 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sptbn1Q62261 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptbn1Q62261 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.16■□□□□ 0.82
Sptbn1Q62261 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptbn1Q62261 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sptbn1Q62261 Gm30023-201ENSMUST00000197970 889 ntBASIC20.15■□□□□ 0.82
Sptbn1Q62261 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sptbn1Q62261 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Sptbn1Q62261 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sptbn1Q62261 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Sptbn1Q62261 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sptbn1Q62261 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Sptbn1Q62261 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Sptbn1Q62261 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.14■□□□□ 0.81
Sptbn1Q62261 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Sptbn1Q62261 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sptbn1Q62261 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptbn1Q62261 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Sptbn1Q62261 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.13■□□□□ 0.81
Sptbn1Q62261 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Sptbn1Q62261 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptbn1Q62261 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Sptbn1Q62261 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sptbn1Q62261 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sptbn1Q62261 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.09■□□□□ 0.81
Sptbn1Q62261 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sptbn1Q62261 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.09■□□□□ 0.81
Sptbn1Q62261 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sptbn1Q62261 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sptbn1Q62261 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.08■□□□□ 0.8
Sptbn1Q62261 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.08■□□□□ 0.8
Sptbn1Q62261 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.07■□□□□ 0.8
Sptbn1Q62261 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sptbn1Q62261 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Sptbn1Q62261 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sptbn1Q62261 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms