Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SspnQ62147 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SspnQ62147 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SspnQ62147 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SspnQ62147 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
SspnQ62147 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SspnQ62147 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SspnQ62147 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SspnQ62147 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SspnQ62147 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SspnQ62147 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SspnQ62147 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SspnQ62147 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SspnQ62147 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SspnQ62147 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SspnQ62147 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SspnQ62147 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SspnQ62147 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SspnQ62147 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
SspnQ62147 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.46■□□□□ 0.71
SspnQ62147 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SspnQ62147 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SspnQ62147 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SspnQ62147 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SspnQ62147 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SspnQ62147 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SspnQ62147 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.45■□□□□ 0.7
SspnQ62147 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SspnQ62147 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
SspnQ62147 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SspnQ62147 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SspnQ62147 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SspnQ62147 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SspnQ62147 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SspnQ62147 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SspnQ62147 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SspnQ62147 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SspnQ62147 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SspnQ62147 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SspnQ62147 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SspnQ62147 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SspnQ62147 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SspnQ62147 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SspnQ62147 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SspnQ62147 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SspnQ62147 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.4■□□□□ 0.7
SspnQ62147 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SspnQ62147 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SspnQ62147 Gm30023-201ENSMUST00000197970 889 ntBASIC19.39■□□□□ 0.69
SspnQ62147 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SspnQ62147 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SspnQ62147 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SspnQ62147 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.38■□□□□ 0.69
SspnQ62147 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SspnQ62147 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.38■□□□□ 0.69
SspnQ62147 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.38■□□□□ 0.69
SspnQ62147 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SspnQ62147 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SspnQ62147 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SspnQ62147 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SspnQ62147 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SspnQ62147 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SspnQ62147 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SspnQ62147 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SspnQ62147 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SspnQ62147 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SspnQ62147 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SspnQ62147 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.35■□□□□ 0.69
SspnQ62147 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SspnQ62147 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SspnQ62147 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SspnQ62147 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SspnQ62147 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SspnQ62147 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.35■□□□□ 0.69
SspnQ62147 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SspnQ62147 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SspnQ62147 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SspnQ62147 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SspnQ62147 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SspnQ62147 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SspnQ62147 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SspnQ62147 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SspnQ62147 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SspnQ62147 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.32■□□□□ 0.68
SspnQ62147 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SspnQ62147 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SspnQ62147 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SspnQ62147 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SspnQ62147 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SspnQ62147 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.3■□□□□ 0.68
SspnQ62147 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SspnQ62147 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SspnQ62147 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SspnQ62147 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SspnQ62147 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SspnQ62147 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SspnQ62147 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SspnQ62147 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SspnQ62147 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SspnQ62147 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms