Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ripk1Q60855 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.12■■□□□ 1.13
Ripk1Q60855 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ripk1Q60855 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ripk1Q60855 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Ripk1Q60855 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Ripk1Q60855 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ripk1Q60855 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ripk1Q60855 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Ripk1Q60855 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ripk1Q60855 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Ripk1Q60855 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Ripk1Q60855 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Ripk1Q60855 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
Ripk1Q60855 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Ripk1Q60855 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.09■■□□□ 1.13
Ripk1Q60855 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ripk1Q60855 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ripk1Q60855 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ripk1Q60855 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Ripk1Q60855 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ripk1Q60855 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ripk1Q60855 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ripk1Q60855 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ripk1Q60855 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ripk1Q60855 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.07■■□□□ 1.12
Ripk1Q60855 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ripk1Q60855 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ripk1Q60855 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ripk1Q60855 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ripk1Q60855 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ripk1Q60855 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ripk1Q60855 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Ripk1Q60855 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.04■■□□□ 1.12
Ripk1Q60855 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ripk1Q60855 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ripk1Q60855 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ripk1Q60855 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ripk1Q60855 Nkain2-201ENSMUST00000092602 558 ntBASIC22.03■■□□□ 1.12
Ripk1Q60855 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ripk1Q60855 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ripk1Q60855 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ripk1Q60855 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
Ripk1Q60855 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC22.02■■□□□ 1.12
Ripk1Q60855 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ripk1Q60855 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ripk1Q60855 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ripk1Q60855 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ripk1Q60855 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ripk1Q60855 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ripk1Q60855 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22■■□□□ 1.11
Ripk1Q60855 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ripk1Q60855 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ripk1Q60855 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22■■□□□ 1.11
Ripk1Q60855 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Ripk1Q60855 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Ripk1Q60855 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.99■■□□□ 1.11
Ripk1Q60855 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ripk1Q60855 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ripk1Q60855 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ripk1Q60855 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ripk1Q60855 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ripk1Q60855 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ripk1Q60855 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.96■■□□□ 1.11
Ripk1Q60855 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ripk1Q60855 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ripk1Q60855 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ripk1Q60855 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ripk1Q60855 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.95■■□□□ 1.1
Ripk1Q60855 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.94■■□□□ 1.1
Ripk1Q60855 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.94■■□□□ 1.1
Ripk1Q60855 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ripk1Q60855 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.93■■□□□ 1.1
Ripk1Q60855 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ripk1Q60855 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Ripk1Q60855 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.92■■□□□ 1.1
Ripk1Q60855 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ripk1Q60855 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ripk1Q60855 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ripk1Q60855 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ripk1Q60855 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ripk1Q60855 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ripk1Q60855 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ripk1Q60855 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
Ripk1Q60855 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ripk1Q60855 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.88■■□□□ 1.09
Ripk1Q60855 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ripk1Q60855 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Ripk1Q60855 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ripk1Q60855 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Ripk1Q60855 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ripk1Q60855 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.85■■□□□ 1.09
Ripk1Q60855 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ripk1Q60855 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ripk1Q60855 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.84■■□□□ 1.09
Ripk1Q60855 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.84■■□□□ 1.09
Ripk1Q60855 Gm6821-201ENSMUST00000107540 542 ntBASIC21.84■■□□□ 1.09
Ripk1Q60855 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ripk1Q60855 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
Ripk1Q60855 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms