Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav2Q5R1I9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav2Q5R1I9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trav2Q5R1I9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Trav2Q5R1I9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav2Q5R1I9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav2Q5R1I9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav2Q5R1I9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trav2Q5R1I9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Trav2Q5R1I9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav2Q5R1I9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.77■□□□□ 0.6
Trav2Q5R1I9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.77■□□□□ 0.6
Trav2Q5R1I9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav2Q5R1I9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav2Q5R1I9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trav2Q5R1I9 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.75■□□□□ 0.59
Trav2Q5R1I9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav2Q5R1I9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav2Q5R1I9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav2Q5R1I9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav2Q5R1I9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav2Q5R1I9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav2Q5R1I9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav2Q5R1I9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav2Q5R1I9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Trav2Q5R1I9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav2Q5R1I9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav2Q5R1I9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trav2Q5R1I9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav2Q5R1I9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Trav2Q5R1I9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav2Q5R1I9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav2Q5R1I9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.69■□□□□ 0.58
Trav2Q5R1I9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav2Q5R1I9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav2Q5R1I9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Trav2Q5R1I9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.68■□□□□ 0.58
Trav2Q5R1I9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav2Q5R1I9 Gm6311-201ENSMUST00000073790 878 ntBASIC18.67■□□□□ 0.58
Trav2Q5R1I9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav2Q5R1I9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav2Q5R1I9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trav2Q5R1I9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav2Q5R1I9 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav2Q5R1I9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav2Q5R1I9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav2Q5R1I9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.65■□□□□ 0.58
Trav2Q5R1I9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav2Q5R1I9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.64■□□□□ 0.57
Trav2Q5R1I9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav2Q5R1I9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trav2Q5R1I9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav2Q5R1I9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trav2Q5R1I9 Gm37136-201ENSMUST00000194368 194 ntBASIC18.62■□□□□ 0.57
Trav2Q5R1I9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav2Q5R1I9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.62■□□□□ 0.57
Trav2Q5R1I9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav2Q5R1I9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav2Q5R1I9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav2Q5R1I9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav2Q5R1I9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trav2Q5R1I9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav2Q5R1I9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Trav2Q5R1I9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav2Q5R1I9 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav2Q5R1I9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav2Q5R1I9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav2Q5R1I9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Trav2Q5R1I9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.6■□□□□ 0.57
Trav2Q5R1I9 Gm4799-201ENSMUST00000095396 657 ntBASIC18.6■□□□□ 0.57
Trav2Q5R1I9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav2Q5R1I9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav2Q5R1I9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav2Q5R1I9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Trav2Q5R1I9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.59■□□□□ 0.57
Trav2Q5R1I9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Trav2Q5R1I9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav2Q5R1I9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav2Q5R1I9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav2Q5R1I9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Trav2Q5R1I9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.58■□□□□ 0.56
Trav2Q5R1I9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav2Q5R1I9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav2Q5R1I9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trav2Q5R1I9 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav2Q5R1I9 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Trav2Q5R1I9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav2Q5R1I9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav2Q5R1I9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav2Q5R1I9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav2Q5R1I9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Trav2Q5R1I9 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.55■□□□□ 0.56
Trav2Q5R1I9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav2Q5R1I9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav2Q5R1I9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav2Q5R1I9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trav2Q5R1I9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav2Q5R1I9 Mir6538-201ENSMUST00000183713 110 ntBASIC18.54■□□□□ 0.56
Trav2Q5R1I9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trav2Q5R1I9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms