Protein–RNA interactions for Protein: Q3UTB7

Foxr1, Forkhead box protein R1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxr1Q3UTB7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Foxr1Q3UTB7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.29■■□□□ 1.48
Foxr1Q3UTB7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Foxr1Q3UTB7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Foxr1Q3UTB7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
Foxr1Q3UTB7 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Foxr1Q3UTB7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Foxr1Q3UTB7 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Foxr1Q3UTB7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Foxr1Q3UTB7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Foxr1Q3UTB7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Foxr1Q3UTB7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Foxr1Q3UTB7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Foxr1Q3UTB7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
Foxr1Q3UTB7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.24■■□□□ 1.47
Foxr1Q3UTB7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Foxr1Q3UTB7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Foxr1Q3UTB7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Foxr1Q3UTB7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Foxr1Q3UTB7 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Foxr1Q3UTB7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.22■■□□□ 1.47
Foxr1Q3UTB7 Gm6311-201ENSMUST00000073790 878 ntBASIC24.22■■□□□ 1.47
Foxr1Q3UTB7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Foxr1Q3UTB7 Gm37136-201ENSMUST00000194368 194 ntBASIC24.21■■□□□ 1.47
Foxr1Q3UTB7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.21■■□□□ 1.47
Foxr1Q3UTB7 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Foxr1Q3UTB7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Foxr1Q3UTB7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Foxr1Q3UTB7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Foxr1Q3UTB7 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Foxr1Q3UTB7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Foxr1Q3UTB7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Foxr1Q3UTB7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Foxr1Q3UTB7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
Foxr1Q3UTB7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC24.18■■□□□ 1.46
Foxr1Q3UTB7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Foxr1Q3UTB7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Foxr1Q3UTB7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC24.18■■□□□ 1.46
Foxr1Q3UTB7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
Foxr1Q3UTB7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Foxr1Q3UTB7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Foxr1Q3UTB7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Foxr1Q3UTB7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Foxr1Q3UTB7 Amer2-203ENSMUST00000225247 2662 ntBASIC24.16■■□□□ 1.46
Foxr1Q3UTB7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Foxr1Q3UTB7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Foxr1Q3UTB7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC24.15■■□□□ 1.46
Foxr1Q3UTB7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
Foxr1Q3UTB7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.13■■□□□ 1.45
Foxr1Q3UTB7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.13■■□□□ 1.45
Foxr1Q3UTB7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
Foxr1Q3UTB7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
Foxr1Q3UTB7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Foxr1Q3UTB7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Foxr1Q3UTB7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Foxr1Q3UTB7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC24.11■■□□□ 1.45
Foxr1Q3UTB7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Foxr1Q3UTB7 Gm4799-201ENSMUST00000095396 657 ntBASIC24.11■■□□□ 1.45
Foxr1Q3UTB7 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Foxr1Q3UTB7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Foxr1Q3UTB7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC24.1■■□□□ 1.45
Foxr1Q3UTB7 Mir6538-201ENSMUST00000183713 110 ntBASIC24.1■■□□□ 1.45
Foxr1Q3UTB7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Foxr1Q3UTB7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Foxr1Q3UTB7 Gm11175-201ENSMUST00000116172 543 ntBASIC24.09■■□□□ 1.45
Foxr1Q3UTB7 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.09■■□□□ 1.45
Foxr1Q3UTB7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
Foxr1Q3UTB7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Foxr1Q3UTB7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Foxr1Q3UTB7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Foxr1Q3UTB7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Foxr1Q3UTB7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
Foxr1Q3UTB7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Foxr1Q3UTB7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Foxr1Q3UTB7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC24.06■■□□□ 1.44
Foxr1Q3UTB7 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Foxr1Q3UTB7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Foxr1Q3UTB7 Mir3960-201ENSMUST00000198213 73 ntBASIC24.04■■□□□ 1.44
Foxr1Q3UTB7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Foxr1Q3UTB7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Foxr1Q3UTB7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Foxr1Q3UTB7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Foxr1Q3UTB7 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.01■■□□□ 1.43
Foxr1Q3UTB7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24■■□□□ 1.43
Foxr1Q3UTB7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Foxr1Q3UTB7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.98■■□□□ 1.43
Foxr1Q3UTB7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Foxr1Q3UTB7 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.98■■□□□ 1.43
Foxr1Q3UTB7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Foxr1Q3UTB7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Foxr1Q3UTB7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Foxr1Q3UTB7 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Foxr1Q3UTB7 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.97■■□□□ 1.43
Foxr1Q3UTB7 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.97■■□□□ 1.43
Foxr1Q3UTB7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.97■■□□□ 1.43
Foxr1Q3UTB7 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.97■■□□□ 1.43
Foxr1Q3UTB7 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Foxr1Q3UTB7 Gm45364-201ENSMUST00000210883 159 ntBASIC23.96■■□□□ 1.43
Foxr1Q3UTB7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.96■■□□□ 1.43
Foxr1Q3UTB7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms