Protein–RNA interactions for Protein: Q3U2A8

Vars2, Valine--tRNA ligase, mitochondrial, mousemouse

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vars2Q3U2A8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Vars2Q3U2A8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
Vars2Q3U2A8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Vars2Q3U2A8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Vars2Q3U2A8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Vars2Q3U2A8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Vars2Q3U2A8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Vars2Q3U2A8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
Vars2Q3U2A8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Vars2Q3U2A8 Pcf11-205ENSMUST00000208255 1720 ntBASIC30.7■■■□□ 2.51
Vars2Q3U2A8 Gm5067-201ENSMUST00000170449 1009 ntBASIC30.69■■■□□ 2.5
Vars2Q3U2A8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC30.69■■■□□ 2.5
Vars2Q3U2A8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Vars2Q3U2A8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
Vars2Q3U2A8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Vars2Q3U2A8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Vars2Q3U2A8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Vars2Q3U2A8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
Vars2Q3U2A8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Vars2Q3U2A8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Vars2Q3U2A8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Vars2Q3U2A8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Vars2Q3U2A8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC30.64■■■□□ 2.5
Vars2Q3U2A8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC30.64■■■□□ 2.5
Vars2Q3U2A8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
Vars2Q3U2A8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
Vars2Q3U2A8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Vars2Q3U2A8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Vars2Q3U2A8 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.63■■■□□ 2.49
Vars2Q3U2A8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
Vars2Q3U2A8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC30.61■■■□□ 2.49
Vars2Q3U2A8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Vars2Q3U2A8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Vars2Q3U2A8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Vars2Q3U2A8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Vars2Q3U2A8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Vars2Q3U2A8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
Vars2Q3U2A8 Gm5921-201ENSMUST00000075898 882 ntBASIC30.58■■■□□ 2.49
Vars2Q3U2A8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Vars2Q3U2A8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Vars2Q3U2A8 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Vars2Q3U2A8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
Vars2Q3U2A8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Vars2Q3U2A8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Vars2Q3U2A8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC30.55■■■□□ 2.48
Vars2Q3U2A8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Vars2Q3U2A8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Vars2Q3U2A8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Vars2Q3U2A8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC30.54■■■□□ 2.48
Vars2Q3U2A8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Vars2Q3U2A8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Vars2Q3U2A8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
Vars2Q3U2A8 Gm15546-201ENSMUST00000122095 826 ntBASIC30.53■■■□□ 2.48
Vars2Q3U2A8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Vars2Q3U2A8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Vars2Q3U2A8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
Vars2Q3U2A8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Vars2Q3U2A8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
Vars2Q3U2A8 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.51■■■□□ 2.48
Vars2Q3U2A8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Vars2Q3U2A8 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.51■■■□□ 2.47
Vars2Q3U2A8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Vars2Q3U2A8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC30.5■■■□□ 2.47
Vars2Q3U2A8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Vars2Q3U2A8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
Vars2Q3U2A8 Gm10420-201ENSMUST00000121713 882 ntBASIC30.48■■■□□ 2.47
Vars2Q3U2A8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
Vars2Q3U2A8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
Vars2Q3U2A8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Vars2Q3U2A8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.45■■■□□ 2.47
Vars2Q3U2A8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Vars2Q3U2A8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Vars2Q3U2A8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC30.44■■■□□ 2.46
Vars2Q3U2A8 Gm37136-201ENSMUST00000194368 194 ntBASIC30.44■■■□□ 2.46
Vars2Q3U2A8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Vars2Q3U2A8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Vars2Q3U2A8 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Vars2Q3U2A8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Vars2Q3U2A8 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Vars2Q3U2A8 AC151971.4-201ENSMUST00000214717 704 ntBASIC30.42■■■□□ 2.46
Vars2Q3U2A8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Vars2Q3U2A8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC30.41■■■□□ 2.46
Vars2Q3U2A8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Vars2Q3U2A8 Gm9910-201ENSMUST00000195385 1550 ntBASIC30.38■■■□□ 2.45
Vars2Q3U2A8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.38■■■□□ 2.45
Vars2Q3U2A8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC30.38■■■□□ 2.45
Vars2Q3U2A8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC30.38■■■□□ 2.45
Vars2Q3U2A8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Vars2Q3U2A8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Vars2Q3U2A8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC30.37■■■□□ 2.45
Vars2Q3U2A8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC30.36■■■□□ 2.45
Vars2Q3U2A8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Vars2Q3U2A8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.35■■■□□ 2.45
Vars2Q3U2A8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Vars2Q3U2A8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Vars2Q3U2A8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Vars2Q3U2A8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Vars2Q3U2A8 Gm5522-201ENSMUST00000189483 1242 ntBASIC30.34■■■□□ 2.45
Vars2Q3U2A8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Vars2Q3U2A8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms