Protein–RNA interactions for Protein: Q3TFD2

Lpcat1, Lysophosphatidylcholine acyltransferase 1, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lpcat1Q3TFD2 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Lpcat1Q3TFD2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Lpcat1Q3TFD2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Lpcat1Q3TFD2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Lpcat1Q3TFD2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.4■■□□□ 1.18
Lpcat1Q3TFD2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lpcat1Q3TFD2 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.4■■□□□ 1.18
Lpcat1Q3TFD2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Lpcat1Q3TFD2 Gm9397-201ENSMUST00000200125 605 ntBASIC22.39■■□□□ 1.17
Lpcat1Q3TFD2 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.39■■□□□ 1.17
Lpcat1Q3TFD2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lpcat1Q3TFD2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Lpcat1Q3TFD2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lpcat1Q3TFD2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Lpcat1Q3TFD2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.38■■□□□ 1.17
Lpcat1Q3TFD2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.38■■□□□ 1.17
Lpcat1Q3TFD2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lpcat1Q3TFD2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Lpcat1Q3TFD2 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
Lpcat1Q3TFD2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lpcat1Q3TFD2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lpcat1Q3TFD2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Lpcat1Q3TFD2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.36■■□□□ 1.17
Lpcat1Q3TFD2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.36■■□□□ 1.17
Lpcat1Q3TFD2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lpcat1Q3TFD2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Lpcat1Q3TFD2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lpcat1Q3TFD2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Lpcat1Q3TFD2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Lpcat1Q3TFD2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.34■■□□□ 1.17
Lpcat1Q3TFD2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Lpcat1Q3TFD2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Lpcat1Q3TFD2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lpcat1Q3TFD2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lpcat1Q3TFD2 Gm24970-201ENSMUST00000175582 82 ntBASIC22.31■■□□□ 1.16
Lpcat1Q3TFD2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lpcat1Q3TFD2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lpcat1Q3TFD2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lpcat1Q3TFD2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lpcat1Q3TFD2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Lpcat1Q3TFD2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Lpcat1Q3TFD2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lpcat1Q3TFD2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Lpcat1Q3TFD2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lpcat1Q3TFD2 Gm45855-201ENSMUST00000212546 880 ntBASIC22.29■■□□□ 1.16
Lpcat1Q3TFD2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Lpcat1Q3TFD2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lpcat1Q3TFD2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lpcat1Q3TFD2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Lpcat1Q3TFD2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Lpcat1Q3TFD2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Lpcat1Q3TFD2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Lpcat1Q3TFD2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Lpcat1Q3TFD2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.27■■□□□ 1.16
Lpcat1Q3TFD2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lpcat1Q3TFD2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.27■■□□□ 1.16
Lpcat1Q3TFD2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Lpcat1Q3TFD2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Lpcat1Q3TFD2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.26■■□□□ 1.15
Lpcat1Q3TFD2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lpcat1Q3TFD2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lpcat1Q3TFD2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lpcat1Q3TFD2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lpcat1Q3TFD2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Lpcat1Q3TFD2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lpcat1Q3TFD2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Lpcat1Q3TFD2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.25■■□□□ 1.15
Lpcat1Q3TFD2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
Lpcat1Q3TFD2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Lpcat1Q3TFD2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC22.24■■□□□ 1.15
Lpcat1Q3TFD2 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lpcat1Q3TFD2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Lpcat1Q3TFD2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lpcat1Q3TFD2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.23■■□□□ 1.15
Lpcat1Q3TFD2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lpcat1Q3TFD2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Lpcat1Q3TFD2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lpcat1Q3TFD2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lpcat1Q3TFD2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.22■■□□□ 1.15
Lpcat1Q3TFD2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lpcat1Q3TFD2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
Lpcat1Q3TFD2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Lpcat1Q3TFD2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Lpcat1Q3TFD2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lpcat1Q3TFD2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lpcat1Q3TFD2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Lpcat1Q3TFD2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
Lpcat1Q3TFD2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Lpcat1Q3TFD2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Lpcat1Q3TFD2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Lpcat1Q3TFD2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Lpcat1Q3TFD2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Lpcat1Q3TFD2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lpcat1Q3TFD2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Lpcat1Q3TFD2 Il17rd-202ENSMUST00000223942 2186 ntBASIC22.18■■□□□ 1.14
Lpcat1Q3TFD2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lpcat1Q3TFD2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Lpcat1Q3TFD2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lpcat1Q3TFD2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Lpcat1Q3TFD2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms