Protein–RNA interactions for Protein: P98083

Shc1, SHC-transforming protein 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc1P98083 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shc1P98083 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.24■□□□□ 0.99
Shc1P98083 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Shc1P98083 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Shc1P98083 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Shc1P98083 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Shc1P98083 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.23■□□□□ 0.99
Shc1P98083 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Shc1P98083 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Shc1P98083 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shc1P98083 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Shc1P98083 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shc1P98083 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shc1P98083 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Shc1P98083 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shc1P98083 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shc1P98083 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Shc1P98083 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Shc1P98083 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Shc1P98083 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shc1P98083 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Shc1P98083 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Shc1P98083 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Shc1P98083 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Shc1P98083 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.14■□□□□ 0.97
Shc1P98083 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Shc1P98083 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Shc1P98083 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.12■□□□□ 0.97
Shc1P98083 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.12■□□□□ 0.97
Shc1P98083 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Shc1P98083 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Shc1P98083 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Shc1P98083 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Shc1P98083 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Shc1P98083 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Shc1P98083 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Shc1P98083 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shc1P98083 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Shc1P98083 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shc1P98083 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shc1P98083 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shc1P98083 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.07■□□□□ 0.96
Shc1P98083 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shc1P98083 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shc1P98083 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Shc1P98083 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shc1P98083 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shc1P98083 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
Shc1P98083 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.05■□□□□ 0.96
Shc1P98083 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.04■□□□□ 0.96
Shc1P98083 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.04■□□□□ 0.96
Shc1P98083 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shc1P98083 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shc1P98083 Particl-201ENSMUST00000205370 1560 ntBASIC21.03■□□□□ 0.96
Shc1P98083 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
Shc1P98083 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shc1P98083 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shc1P98083 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shc1P98083 Gm7432-201ENSMUST00000210343 879 ntBASIC21.02■□□□□ 0.96
Shc1P98083 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shc1P98083 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shc1P98083 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shc1P98083 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.02■□□□□ 0.95
Shc1P98083 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shc1P98083 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Shc1P98083 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.01■□□□□ 0.95
Shc1P98083 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Shc1P98083 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shc1P98083 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Shc1P98083 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shc1P98083 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shc1P98083 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shc1P98083 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shc1P98083 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Shc1P98083 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shc1P98083 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shc1P98083 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shc1P98083 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shc1P98083 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shc1P98083 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Shc1P98083 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Shc1P98083 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.97■□□□□ 0.95
Shc1P98083 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Shc1P98083 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shc1P98083 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.96■□□□□ 0.95
Shc1P98083 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shc1P98083 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shc1P98083 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shc1P98083 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.95■□□□□ 0.94
Shc1P98083 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.95■□□□□ 0.94
Shc1P98083 Gm11599-201ENSMUST00000118720 878 ntBASIC20.94■□□□□ 0.94
Shc1P98083 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.94■□□□□ 0.94
Shc1P98083 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shc1P98083 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shc1P98083 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shc1P98083 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shc1P98083 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shc1P98083 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shc1P98083 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Shc1P98083 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms