Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cdh6P97326 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Cdh6P97326 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cdh6P97326 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cdh6P97326 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.97■■□□□ 1.43
Cdh6P97326 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdh6P97326 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cdh6P97326 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Cdh6P97326 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
Cdh6P97326 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.95■■□□□ 1.42
Cdh6P97326 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Cdh6P97326 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.94■■□□□ 1.42
Cdh6P97326 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cdh6P97326 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.94■■□□□ 1.42
Cdh6P97326 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cdh6P97326 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cdh6P97326 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cdh6P97326 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cdh6P97326 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cdh6P97326 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Cdh6P97326 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cdh6P97326 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cdh6P97326 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cdh6P97326 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Cdh6P97326 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cdh6P97326 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Cdh6P97326 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cdh6P97326 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cdh6P97326 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cdh6P97326 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cdh6P97326 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.86■■□□□ 1.41
Cdh6P97326 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cdh6P97326 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cdh6P97326 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Cdh6P97326 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cdh6P97326 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cdh6P97326 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cdh6P97326 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Cdh6P97326 Particl-201ENSMUST00000205370 1560 ntBASIC23.83■■□□□ 1.41
Cdh6P97326 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cdh6P97326 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cdh6P97326 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cdh6P97326 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.81■■□□□ 1.4
Cdh6P97326 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.81■■□□□ 1.4
Cdh6P97326 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdh6P97326 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdh6P97326 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdh6P97326 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cdh6P97326 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cdh6P97326 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cdh6P97326 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh6P97326 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh6P97326 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh6P97326 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh6P97326 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh6P97326 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh6P97326 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cdh6P97326 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Cdh6P97326 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Cdh6P97326 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Cdh6P97326 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Cdh6P97326 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cdh6P97326 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Cdh6P97326 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.75■■□□□ 1.39
Cdh6P97326 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cdh6P97326 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Cdh6P97326 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdh6P97326 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdh6P97326 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cdh6P97326 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.72■■□□□ 1.39
Cdh6P97326 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.72■■□□□ 1.39
Cdh6P97326 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.72■■□□□ 1.39
Cdh6P97326 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Cdh6P97326 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cdh6P97326 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdh6P97326 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.71■■□□□ 1.39
Cdh6P97326 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdh6P97326 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdh6P97326 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.71■■□□□ 1.39
Cdh6P97326 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cdh6P97326 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.7■■□□□ 1.38
Cdh6P97326 Gm7432-201ENSMUST00000210343 879 ntBASIC23.69■■□□□ 1.38
Cdh6P97326 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cdh6P97326 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cdh6P97326 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.69■■□□□ 1.38
Cdh6P97326 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Cdh6P97326 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.68■■□□□ 1.38
Cdh6P97326 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Cdh6P97326 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cdh6P97326 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cdh6P97326 Gm37136-201ENSMUST00000194368 194 ntBASIC23.66■■□□□ 1.38
Cdh6P97326 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.65■■□□□ 1.38
Cdh6P97326 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Cdh6P97326 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Cdh6P97326 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.64■■□□□ 1.38
Cdh6P97326 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Cdh6P97326 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cdh6P97326 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Cdh6P97326 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Cdh6P97326 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms